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STAR Protoc. 2021 Feb 16;2(1):100350. doi: 10.1016/j.xpro.2021.100350. eCollection 2021 Mar 19.

Purification and cryoelectron microscopy structure determination of human V-ATPase.

STAR protocols

Longfei Wang, Zhenhang Chen, Hao Wu, Tian-Min Fu

Affiliations

  1. Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA.
  2. Program in Cellular and Molecular Medicine, Boston Children's Hospital, Boston, MA 02115, USA.
  3. Department of Biological Chemistry and Pharmacology, The Ohio State University, Columbus, OH 43210, USA.
  4. The Ohio State University Comprehensive Cancer Center, Columbus, OH 43210, USA.

PMID: 33665630 PMCID: PMC7902551 DOI: 10.1016/j.xpro.2021.100350

Abstract

Vesicular- or vacuolar-type adenosine triphosphatases (V-ATPases) are multi-component, ATP-driven proton pumps, which play important roles in many physiological processes by acidifying intracellular vesicles, organelles, and the extracellular milieu. Long-standing challenges in purifying mammalian V-ATPases have limited the biochemical and structural study of mammalian V-ATPase. Here, we provide a protocol for purifying milligrams of human V-ATPase and detail procedures for the reconstruction of its structure by cryo-EM. Our method can be applied to any biochemical and biophysical study of human V-ATPase. For complete details on the use and execution of this protocol, please refer to Wang et al. (2020).

© 2021 The Author(s).

Keywords: Biophysics; Cryo-EM; Molecular biology; Protein biochemistry; Protein expression and purification; Structural biology

Conflict of interest statement

H.W. is a member of scientific advisory board of Cell. The other authors declare no competing interests.

References

  1. J Comput Chem. 2004 Oct;25(13):1605-12 - PubMed
  2. Acta Crystallogr D Biol Crystallogr. 2010 Feb;66(Pt 2):213-21 - PubMed
  3. Nucleic Acids Res. 2014 Jul;42(Web Server issue):W252-8 - PubMed
  4. Mol Cell. 2020 Nov 5;80(3):501-511.e3 - PubMed
  5. PLoS Pathog. 2010 Mar 19;6(3):e1000822 - PubMed
  6. J Struct Biol. 2012 Dec;180(3):519-30 - PubMed
  7. J Struct Biol. 2015 Nov;192(2):216-21 - PubMed
  8. Nat Methods. 2017 Mar;14(3):290-296 - PubMed
  9. J Struct Biol. 2005 Oct;152(1):36-51 - PubMed
  10. Acta Crystallogr D Biol Crystallogr. 2004 Dec;60(Pt 12 Pt 1):2126-32 - PubMed
  11. Commun Biol. 2019 Jun 19;2:218 - PubMed
  12. Nat Methods. 2017 Apr;14(4):331-332 - PubMed

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