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Electron and hole mobilities in polymorphs of benzene and naphthalene: role of intermolecular interactions.

The Journal of chemical physics

Datta A, Mohakud S, Pati SK.
PMID: 17444735
J Chem Phys. 2007 Apr 14;126(14):144710. doi: 10.1063/1.2721530.

The hole and electron mobilities of the polymorphs of benzene and naphthalene crystals are estimated through quantum chemical calculations. The reorganization energy (lambda) and the charge-transfer matrix elements (Hmn) calculated for the two molecules reveal that these crystals can...

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Datta A, Mohakud S, Pati SK. Electron and hole mobilities in polymorphs of benzene and naphthalene: role of intermolecular interactions. J Chem Phys. 2007;126(14):144710doi: 10.1063/1.2721530.
Datta, A., Mohakud, S., & Pati, S. K. (2007). Electron and hole mobilities in polymorphs of benzene and naphthalene: role of intermolecular interactions. The Journal of chemical physics, 126(14), 144710. https://doi.org/10.1063/1.2721530
Datta, Ayan, et al. "Electron and hole mobilities in polymorphs of benzene and naphthalene: role of intermolecular interactions." The Journal of chemical physics vol. 126,14 (2007): 144710. doi: https://doi.org/10.1063/1.2721530
Datta A, Mohakud S, Pati SK. Electron and hole mobilities in polymorphs of benzene and naphthalene: role of intermolecular interactions. J Chem Phys. 2007 Apr 14;126(14):144710. doi: 10.1063/1.2721530. PMID: 17444735.
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Complete genome sequence of Hydrogenobacter thermophilus type strain (TK-6).

Standards in genomic sciences

Zeytun A, Sikorski J, Nolan M, Lapidus A, Lucas S, Han J, Tice H, Cheng JF, Tapia R, Goodwin L, Pitluck S, Liolios K, Ivanova N, Mavromatis K, Mikhailova N, Ovchinnikova G, Pati A, Chen A, Palaniappan K, Ngatchou-Djao OD, Land M, Hauser L, Jeffries CD, Han C, Detter JC, Ubler S, Rohde M, Tindall BJ, Göker M, Wirth R, Woyke T, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Klenk HP, Kyrpides NC.
PMID: 21677850
Stand Genomic Sci. 2011 Apr 29;4(2):131-43. doi: 10.4056/sigs.1463589.

Hydrogenobacter thermophilus Kawasumi et al. 1984 is the type species of the genus Hydrogenobacter. H. thermophilus was the first obligate autotrophic organism reported among aerobic hydrogen-oxidizing bacteria. Strain TK-6(T) is of interest because of the unusually efficient hydrogen-oxidizing ability...

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Zeytun A, Sikorski J, Nolan M, et al. Complete genome sequence of Hydrogenobacter thermophilus type strain (TK-6). Stand Genomic Sci. 2011;4(2):131-43doi: 10.4056/sigs.1463589.
Zeytun, A., Sikorski, J., Nolan, M., Lapidus, A., Lucas, S., Han, J., Tice, H., Cheng, J. F., Tapia, R., Goodwin, L., Pitluck, S., Liolios, K., Ivanova, N., Mavromatis, K., Mikhailova, N., Ovchinnikova, G., Pati, A., Chen, A., Palaniappan, K., Ngatchou-Djao, O. D., Land, M., Hauser, L., Jeffries, C. D., Han, C., Detter, J. C., Ubler, S., Rohde, M., Tindall, B. J., Göker, M., Wirth, R., Woyke, T., Bristow, J., Eisen, J. A., Markowitz, V., Hugenholtz, P., Klenk, H. P., & Kyrpides, N. C. (2011). Complete genome sequence of Hydrogenobacter thermophilus type strain (TK-6). Standards in genomic sciences, 4(2), 131-43. https://doi.org/10.4056/sigs.1463589
Zeytun, Ahmet, et al. "Complete genome sequence of Hydrogenobacter thermophilus type strain (TK-6)." Standards in genomic sciences vol. 4,2 (2011): 131-43. doi: https://doi.org/10.4056/sigs.1463589
Zeytun A, Sikorski J, Nolan M, Lapidus A, Lucas S, Han J, Tice H, Cheng JF, Tapia R, Goodwin L, Pitluck S, Liolios K, Ivanova N, Mavromatis K, Mikhailova N, Ovchinnikova G, Pati A, Chen A, Palaniappan K, Ngatchou-Djao OD, Land M, Hauser L, Jeffries CD, Han C, Detter JC, Ubler S, Rohde M, Tindall BJ, Göker M, Wirth R, Woyke T, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Klenk HP, Kyrpides NC. Complete genome sequence of Hydrogenobacter thermophilus type strain (TK-6). Stand Genomic Sci. 2011 Apr 29;4(2):131-43. doi: 10.4056/sigs.1463589. PMID: 21677850; PMCID: PMC3111988.
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Complete genome sequence of Oceanithermus profundus type strain (506).

Standards in genomic sciences

Pati A, Zhang X, Lapidus A, Nolan M, Lucas S, Del Rio TG, Tice H, Cheng JF, Tapia R, Han C, Goodwin L, Pitluck S, Liolios K, Pagani I, Ivanova N, Mavromatis K, Chen A, Palaniappan K, Hauser L, Jeffries CD, Brambilla EM, Röhl A, Mwirichia R, Rohde M, Tindall BJ, Sikorski J, Wirth R, Göker M, Woyke T, Detter JC, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Land M.
PMID: 21677858
Stand Genomic Sci. 2011 Apr 29;4(2):210-20. doi: 10.4056/sigs.1734292.

Oceanithermus profundus Miroshnichenko et al. 2003 is the type species of the genus Oceanithermus, which belongs to the family Thermaceae. The genus currently comprises two species whose members are thermophilic and are able to reduce sulfur compounds and nitrite....

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Pati A, Zhang X, Lapidus A, et al. Complete genome sequence of Oceanithermus profundus type strain (506). Stand Genomic Sci. 2011;4(2):210-20doi: 10.4056/sigs.1734292.
Pati, A., Zhang, X., Lapidus, A., Nolan, M., Lucas, S., Del Rio, T. G., Tice, H., Cheng, J. F., Tapia, R., Han, C., Goodwin, L., Pitluck, S., Liolios, K., Pagani, I., Ivanova, N., Mavromatis, K., Chen, A., Palaniappan, K., Hauser, L., Jeffries, C. D., Brambilla, E. M., Röhl, A., Mwirichia, R., Rohde, M., Tindall, B. J., Sikorski, J., Wirth, R., Göker, M., Woyke, T., Detter, J. C., Bristow, J., Eisen, J. A., Markowitz, V., Hugenholtz, P., Kyrpides, N. C., Klenk, H. P., & Land, M. (2011). Complete genome sequence of Oceanithermus profundus type strain (506). Standards in genomic sciences, 4(2), 210-20. https://doi.org/10.4056/sigs.1734292
Pati, Amrita, et al. "Complete genome sequence of Oceanithermus profundus type strain (506)." Standards in genomic sciences vol. 4,2 (2011): 210-20. doi: https://doi.org/10.4056/sigs.1734292
Pati A, Zhang X, Lapidus A, Nolan M, Lucas S, Del Rio TG, Tice H, Cheng JF, Tapia R, Han C, Goodwin L, Pitluck S, Liolios K, Pagani I, Ivanova N, Mavromatis K, Chen A, Palaniappan K, Hauser L, Jeffries CD, Brambilla EM, Röhl A, Mwirichia R, Rohde M, Tindall BJ, Sikorski J, Wirth R, Göker M, Woyke T, Detter JC, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Land M. Complete genome sequence of Oceanithermus profundus type strain (506). Stand Genomic Sci. 2011 Apr 29;4(2):210-20. doi: 10.4056/sigs.1734292. PMID: 21677858; PMCID: PMC3111992.
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Intrinsic half-metallicity in modified graphene nanoribbons.

Physical review letters

Dutta S, Manna AK, Pati SK.
PMID: 19392544
Phys Rev Lett. 2009 Mar 06;102(9):096601. doi: 10.1103/PhysRevLett.102.096601. Epub 2009 Mar 03.

We perform first-principles calculations based on density functional theory to study quasi-one-dimensional edge-passivated (with hydrogen) zigzag graphene nanoribbons of various widths with chemical dopants, boron and nitrogen, keeping the whole system isoelectronic. The gradual increase in doping concentration takes...

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Dutta S, Manna AK, Pati SK. Intrinsic half-metallicity in modified graphene nanoribbons. Phys Rev Lett. 2009;102(9):096601doi: 10.1103/PhysRevLett.102.096601.
Dutta, S., Manna, A. K., & Pati, S. K. (2009). Intrinsic half-metallicity in modified graphene nanoribbons. Physical review letters, 102(9), 096601. https://doi.org/10.1103/PhysRevLett.102.096601
Dutta, Sudipta, et al. "Intrinsic half-metallicity in modified graphene nanoribbons." Physical review letters vol. 102,9 (2009): 096601. doi: https://doi.org/10.1103/PhysRevLett.102.096601
Dutta S, Manna AK, Pati SK. Intrinsic half-metallicity in modified graphene nanoribbons. Phys Rev Lett. 2009 Mar 06;102(9):096601. doi: 10.1103/PhysRevLett.102.096601. Epub 2009 Mar 03. PMID: 19392544.
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Complete genome sequence of Saccharomonospora viridis type strain (P101).

Standards in genomic sciences

Pati A, Sikorski J, Nolan M, Lapidus A, Copeland A, Glavina Del Rio T, Lucas S, Chen F, Tice H, Pitluck S, Cheng JF, Chertkov O, Brettin T, Han C, Detter JC, Kuske C, Bruce D, Goodwin L, Chain P, D'haeseleer P, Chen A, Palaniappan K, Ivanova N, Mavromatis K, Mikhailova N, Rohde M, Tindall BJ, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP.
PMID: 21304650
Stand Genomic Sci. 2009 Sep 24;1(2):141-9. doi: 10.4056/sigs.20263.

Saccharomonospora viridis (Schuurmans et al. 1956) Nonomurea and Ohara 1971 is the type species of the genus Saccharomonospora which belongs to the family Pseudonocardiaceae. S. viridis is of interest because it is a Gram-negative organism classified among the usually...

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Pati A, Sikorski J, Nolan M, et al. Complete genome sequence of Saccharomonospora viridis type strain (P101). Stand Genomic Sci. 2009;1(2):141-9doi: 10.4056/sigs.20263.
Pati, A., Sikorski, J., Nolan, M., Lapidus, A., Copeland, A., Glavina Del Rio, T., Lucas, S., Chen, F., Tice, H., Pitluck, S., Cheng, J. F., Chertkov, O., Brettin, T., Han, C., Detter, J. C., Kuske, C., Bruce, D., Goodwin, L., Chain, P., D'haeseleer, P., Chen, A., Palaniappan, K., Ivanova, N., Mavromatis, K., Mikhailova, N., Rohde, M., Tindall, B. J., Göker, M., Bristow, J., Eisen, J. A., Markowitz, V., Hugenholtz, P., Kyrpides, N. C., & Klenk, H. P. (2009). Complete genome sequence of Saccharomonospora viridis type strain (P101). Standards in genomic sciences, 1(2), 141-9. https://doi.org/10.4056/sigs.20263
Pati, Amrita, et al. "Complete genome sequence of Saccharomonospora viridis type strain (P101)." Standards in genomic sciences vol. 1,2 (2009): 141-9. doi: https://doi.org/10.4056/sigs.20263
Pati A, Sikorski J, Nolan M, Lapidus A, Copeland A, Glavina Del Rio T, Lucas S, Chen F, Tice H, Pitluck S, Cheng JF, Chertkov O, Brettin T, Han C, Detter JC, Kuske C, Bruce D, Goodwin L, Chain P, D'haeseleer P, Chen A, Palaniappan K, Ivanova N, Mavromatis K, Mikhailova N, Rohde M, Tindall BJ, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP. Complete genome sequence of Saccharomonospora viridis type strain (P101). Stand Genomic Sci. 2009 Sep 24;1(2):141-9. doi: 10.4056/sigs.20263. PMID: 21304650; PMCID: PMC3035233.
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Complete genome sequence of Rhodothermus marinus type strain (R-10).

Standards in genomic sciences

Nolan M, Tindall BJ, Pomrenke H, Lapidus A, Copeland A, Glavina Del Rio T, Lucas S, Chen F, Tice H, Cheng JF, Saunders E, Han C, Bruce D, Goodwin L, Chain P, Pitluck S, Ovchinikova G, Pati A, Ivanova N, Mavromatis K, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Brettin T, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Detter JC.
PMID: 21304669
Stand Genomic Sci. 2009 Dec 29;1(3):283-90. doi: 10.4056/sigs.46736.

Rhodothermus marinus Alfredsson et al. 1995 is the type species of the genus and is of phylogenetic interest because the Rhodothermaceae represent the deepest lineage in the phylum Bacteroidetes. R. marinus R-10(T) is a Gram-negative, non-motile, non-spore-forming bacterium isolated...

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Nolan M, Tindall BJ, Pomrenke H, et al. Complete genome sequence of Rhodothermus marinus type strain (R-10). Stand Genomic Sci. 2009;1(3):283-90doi: 10.4056/sigs.46736.
Nolan, M., Tindall, B. J., Pomrenke, H., Lapidus, A., Copeland, A., Glavina Del Rio, T., Lucas, S., Chen, F., Tice, H., Cheng, J. F., Saunders, E., Han, C., Bruce, D., Goodwin, L., Chain, P., Pitluck, S., Ovchinikova, G., Pati, A., Ivanova, N., Mavromatis, K., Chen, A., Palaniappan, K., Land, M., Hauser, L., Chang, Y. J., Jeffries, C. D., Brettin, T., Göker, M., Bristow, J., Eisen, J. A., Markowitz, V., Hugenholtz, P., Kyrpides, N. C., Klenk, H. P., & Detter, J. C. (2009). Complete genome sequence of Rhodothermus marinus type strain (R-10). Standards in genomic sciences, 1(3), 283-90. https://doi.org/10.4056/sigs.46736
Nolan, Matt, et al. "Complete genome sequence of Rhodothermus marinus type strain (R-10)." Standards in genomic sciences vol. 1,3 (2009): 283-90. doi: https://doi.org/10.4056/sigs.46736
Nolan M, Tindall BJ, Pomrenke H, Lapidus A, Copeland A, Glavina Del Rio T, Lucas S, Chen F, Tice H, Cheng JF, Saunders E, Han C, Bruce D, Goodwin L, Chain P, Pitluck S, Ovchinikova G, Pati A, Ivanova N, Mavromatis K, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Brettin T, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Detter JC. Complete genome sequence of Rhodothermus marinus type strain (R-10). Stand Genomic Sci. 2009 Dec 29;1(3):283-90. doi: 10.4056/sigs.46736. PMID: 21304669; PMCID: PMC3035238.
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Complete genome sequence of Veillonella parvula type strain (Te3).

Standards in genomic sciences

Gronow S, Welnitz S, Lapidus A, Nolan M, Ivanova N, Glavina Del Rio T, Copeland A, Chen F, Tice H, Pitluck S, Cheng JF, Saunders E, Brettin T, Han C, Detter JC, Bruce D, Goodwin L, Land M, Hauser L, Chang YJ, Jeffries CD, Pati A, Mavromatis K, Mikhailova N, Chen A, Palaniappan K, Chain P, Rohde M, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Lucas S.
PMID: 21304678
Stand Genomic Sci. 2010 Jan 28;2(1):57-65. doi: 10.4056/sigs.521107.

Veillonella parvula (Veillon and Zuber 1898) Prévot 1933 is the type species of the genus Veillonella in the family Veillonellaceae within the order Clostridiales. The species V. parvula is of interest because it is frequently isolated from dental plaque...

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Gronow S, Welnitz S, Lapidus A, et al. Complete genome sequence of Veillonella parvula type strain (Te3). Stand Genomic Sci. 2010;2(1):57-65doi: 10.4056/sigs.521107.
Gronow, S., Welnitz, S., Lapidus, A., Nolan, M., Ivanova, N., Glavina Del Rio, T., Copeland, A., Chen, F., Tice, H., Pitluck, S., Cheng, J. F., Saunders, E., Brettin, T., Han, C., Detter, J. C., Bruce, D., Goodwin, L., Land, M., Hauser, L., Chang, Y. J., Jeffries, C. D., Pati, A., Mavromatis, K., Mikhailova, N., Chen, A., Palaniappan, K., Chain, P., Rohde, M., Göker, M., Bristow, J., Eisen, J. A., Markowitz, V., Hugenholtz, P., Kyrpides, N. C., Klenk, H. P., & Lucas, S. (2010). Complete genome sequence of Veillonella parvula type strain (Te3). Standards in genomic sciences, 2(1), 57-65. https://doi.org/10.4056/sigs.521107
Gronow, Sabine, et al. "Complete genome sequence of Veillonella parvula type strain (Te3)." Standards in genomic sciences vol. 2,1 (2010): 57-65. doi: https://doi.org/10.4056/sigs.521107
Gronow S, Welnitz S, Lapidus A, Nolan M, Ivanova N, Glavina Del Rio T, Copeland A, Chen F, Tice H, Pitluck S, Cheng JF, Saunders E, Brettin T, Han C, Detter JC, Bruce D, Goodwin L, Land M, Hauser L, Chang YJ, Jeffries CD, Pati A, Mavromatis K, Mikhailova N, Chen A, Palaniappan K, Chain P, Rohde M, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Lucas S. Complete genome sequence of Veillonella parvula type strain (Te3). Stand Genomic Sci. 2010 Jan 28;2(1):57-65. doi: 10.4056/sigs.521107. PMID: 21304678; PMCID: PMC3035260.
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Complete genome sequence of Thermocrinis albus type strain (HI 11/12).

Standards in genomic sciences

Wirth R, Sikorski J, Brambilla E, Misra M, Lapidus A, Copeland A, Nolan M, Lucas S, Chen F, Tice H, Cheng JF, Han C, Detter JC, Tapia R, Bruce D, Goodwin L, Pitluck S, Pati A, Anderson I, Ivanova N, Mavromatis K, Mikhailova N, Chen A, Palaniappan K, Bilek Y, Hader T, Land M, Hauser L, Chang YJ, Jeffries CD, Tindall BJ, Rohde M, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP.
PMID: 21304702
Stand Genomic Sci. 2010 Mar 30;2(2):194-202. doi: 10.4056/sigs.761490.

Thermocrinis albus Eder and Huber 2002 is one of three species in the genus Thermocrinis in the family Aquificaceae. Members of this family have become of significant interest because of their involvement in global biogeochemical cycles in high-temperature ecosystems....

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Wirth R, Sikorski J, Brambilla E, et al. Complete genome sequence of Thermocrinis albus type strain (HI 11/12). Stand Genomic Sci. 2010;2(2):194-202doi: 10.4056/sigs.761490.
Wirth, R., Sikorski, J., Brambilla, E., Misra, M., Lapidus, A., Copeland, A., Nolan, M., Lucas, S., Chen, F., Tice, H., Cheng, J. F., Han, C., Detter, J. C., Tapia, R., Bruce, D., Goodwin, L., Pitluck, S., Pati, A., Anderson, I., Ivanova, N., Mavromatis, K., Mikhailova, N., Chen, A., Palaniappan, K., Bilek, Y., Hader, T., Land, M., Hauser, L., Chang, Y. J., Jeffries, C. D., Tindall, B. J., Rohde, M., Göker, M., Bristow, J., Eisen, J. A., Markowitz, V., Hugenholtz, P., Kyrpides, N. C., & Klenk, H. P. (2010). Complete genome sequence of Thermocrinis albus type strain (HI 11/12). Standards in genomic sciences, 2(2), 194-202. https://doi.org/10.4056/sigs.761490
Wirth, Reinhard, et al. "Complete genome sequence of Thermocrinis albus type strain (HI 11/12)." Standards in genomic sciences vol. 2,2 (2010): 194-202. doi: https://doi.org/10.4056/sigs.761490
Wirth R, Sikorski J, Brambilla E, Misra M, Lapidus A, Copeland A, Nolan M, Lucas S, Chen F, Tice H, Cheng JF, Han C, Detter JC, Tapia R, Bruce D, Goodwin L, Pitluck S, Pati A, Anderson I, Ivanova N, Mavromatis K, Mikhailova N, Chen A, Palaniappan K, Bilek Y, Hader T, Land M, Hauser L, Chang YJ, Jeffries CD, Tindall BJ, Rohde M, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP. Complete genome sequence of Thermocrinis albus type strain (HI 11/12). Stand Genomic Sci. 2010 Mar 30;2(2):194-202. doi: 10.4056/sigs.761490. PMID: 21304702; PMCID: PMC3035279.
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Complete genome sequence of Thermosphaera aggregans type strain (M11TL).

Standards in genomic sciences

Spring S, Rachel R, Lapidus A, Davenport K, Tice H, Copeland A, Cheng JF, Lucas S, Chen F, Nolan M, Bruce D, Goodwin L, Pitluck S, Ivanova N, Mavromatis K, Ovchinnikova G, Pati A, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CC, Brettin T, Detter JC, Tapia R, Han C, Heimerl T, Weikl F, Brambilla E, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP.
PMID: 21304709
Stand Genomic Sci. 2010 Jun 15;2(3):245-59. doi: 10.4056/sigs.821804.

Thermosphaera aggregans Huber et al. 1998 is the type species of the genus Thermosphaera, which comprises at the time of writing only one species. This species represents archaea with a hyperthermophilic, heterotrophic, strictly anaerobic and fermentative phenotype. The type...

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Spring S, Rachel R, Lapidus A, et al. Complete genome sequence of Thermosphaera aggregans type strain (M11TL). Stand Genomic Sci. 2010;2(3):245-59doi: 10.4056/sigs.821804.
Spring, S., Rachel, R., Lapidus, A., Davenport, K., Tice, H., Copeland, A., Cheng, J. F., Lucas, S., Chen, F., Nolan, M., Bruce, D., Goodwin, L., Pitluck, S., Ivanova, N., Mavromatis, K., Ovchinnikova, G., Pati, A., Chen, A., Palaniappan, K., Land, M., Hauser, L., Chang, Y. J., Jeffries, C. C., Brettin, T., Detter, J. C., Tapia, R., Han, C., Heimerl, T., Weikl, F., Brambilla, E., Göker, M., Bristow, J., Eisen, J. A., Markowitz, V., Hugenholtz, P., Kyrpides, N. C., & Klenk, H. P. (2010). Complete genome sequence of Thermosphaera aggregans type strain (M11TL). Standards in genomic sciences, 2(3), 245-59. https://doi.org/10.4056/sigs.821804
Spring, Stefan, et al. "Complete genome sequence of Thermosphaera aggregans type strain (M11TL)." Standards in genomic sciences vol. 2,3 (2010): 245-59. doi: https://doi.org/10.4056/sigs.821804
Spring S, Rachel R, Lapidus A, Davenport K, Tice H, Copeland A, Cheng JF, Lucas S, Chen F, Nolan M, Bruce D, Goodwin L, Pitluck S, Ivanova N, Mavromatis K, Ovchinnikova G, Pati A, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CC, Brettin T, Detter JC, Tapia R, Han C, Heimerl T, Weikl F, Brambilla E, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP. Complete genome sequence of Thermosphaera aggregans type strain (M11TL). Stand Genomic Sci. 2010 Jun 15;2(3):245-59. doi: 10.4056/sigs.821804. PMID: 21304709; PMCID: PMC3035292.
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Complete genome sequence of Brachyspira murdochii type strain (56-150).

Standards in genomic sciences

Pati A, Sikorski J, Gronow S, Munk C, Lapidus A, Copeland A, Glavina Del Tio T, Nolan M, Lucas S, Chen F, Tice H, Cheng JF, Han C, Detter JC, Bruce D, Tapia R, Goodwin L, Pitluck S, Liolios K, Ivanova N, Mavromatis K, Mikhailova N, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Spring S, Rohde M, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP.
PMID: 21304710
Stand Genomic Sci. 2010 Jun 15;2(3):260-9. doi: 10.4056/sigs.831993.

Brachyspira murdochii Stanton et al. 1992 is a non-pathogenic, host-associated spirochete of the family Brachyspiraceae. Initially isolated from the intestinal content of a healthy swine, the 'group B spirochaetes' were first described as Serpulina murdochii. Members of the family...

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Pati A, Sikorski J, Gronow S, et al. Complete genome sequence of Brachyspira murdochii type strain (56-150). Stand Genomic Sci. 2010;2(3):260-9doi: 10.4056/sigs.831993.
Pati, A., Sikorski, J., Gronow, S., Munk, C., Lapidus, A., Copeland, A., Glavina Del Tio, T., Nolan, M., Lucas, S., Chen, F., Tice, H., Cheng, J. F., Han, C., Detter, J. C., Bruce, D., Tapia, R., Goodwin, L., Pitluck, S., Liolios, K., Ivanova, N., Mavromatis, K., Mikhailova, N., Chen, A., Palaniappan, K., Land, M., Hauser, L., Chang, Y. J., Jeffries, C. D., Spring, S., Rohde, M., Göker, M., Bristow, J., Eisen, J. A., Markowitz, V., Hugenholtz, P., Kyrpides, N. C., & Klenk, H. P. (2010). Complete genome sequence of Brachyspira murdochii type strain (56-150). Standards in genomic sciences, 2(3), 260-9. https://doi.org/10.4056/sigs.831993
Pati, Amrita, et al. "Complete genome sequence of Brachyspira murdochii type strain (56-150)." Standards in genomic sciences vol. 2,3 (2010): 260-9. doi: https://doi.org/10.4056/sigs.831993
Pati A, Sikorski J, Gronow S, Munk C, Lapidus A, Copeland A, Glavina Del Tio T, Nolan M, Lucas S, Chen F, Tice H, Cheng JF, Han C, Detter JC, Bruce D, Tapia R, Goodwin L, Pitluck S, Liolios K, Ivanova N, Mavromatis K, Mikhailova N, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Spring S, Rohde M, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP. Complete genome sequence of Brachyspira murdochii type strain (56-150). Stand Genomic Sci. 2010 Jun 15;2(3):260-9. doi: 10.4056/sigs.831993. PMID: 21304710; PMCID: PMC3035287.
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Complete genome sequence of Thermaerobacter marianensis type strain (7p75a).

Standards in genomic sciences

Han C, Gu W, Zhang X, Lapidus A, Nolan M, Copeland A, Lucas S, Del Rio TG, Tice H, Cheng JF, Tapia R, Goodwin L, Pitluck S, Pagani I, Ivanova N, Mavromatis K, Mikhailova N, Pati A, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Schneider S, Rohde M, Göker M, Pukall R, Woyke T, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Detter JC.
PMID: 21304738
Stand Genomic Sci. 2010 Dec 15;3(3):337-45. doi: 10.4056/sigs.1373474.

Thermaerobacter marianensis Takai et al. 1999 is the type species of the genus Thermaerobacter, which belongs to the Clostridiales family Incertae Sedis XVII. The species is of special interest because T. marianensis is an aerobic, thermophilic marine bacterium, originally...

Cite
Han C, Gu W, Zhang X, et al. Complete genome sequence of Thermaerobacter marianensis type strain (7p75a). Stand Genomic Sci. 2010;3(3):337-45doi: 10.4056/sigs.1373474.
Han, C., Gu, W., Zhang, X., Lapidus, A., Nolan, M., Copeland, A., Lucas, S., Del Rio, T. G., Tice, H., Cheng, J. F., Tapia, R., Goodwin, L., Pitluck, S., Pagani, I., Ivanova, N., Mavromatis, K., Mikhailova, N., Pati, A., Chen, A., Palaniappan, K., Land, M., Hauser, L., Chang, Y. J., Jeffries, C. D., Schneider, S., Rohde, M., Göker, M., Pukall, R., Woyke, T., Bristow, J., Eisen, J. A., Markowitz, V., Hugenholtz, P., Kyrpides, N. C., Klenk, H. P., & Detter, J. C. (2010). Complete genome sequence of Thermaerobacter marianensis type strain (7p75a). Standards in genomic sciences, 3(3), 337-45. https://doi.org/10.4056/sigs.1373474
Han, Cliff, et al. "Complete genome sequence of Thermaerobacter marianensis type strain (7p75a)." Standards in genomic sciences vol. 3,3 (2010): 337-45. doi: https://doi.org/10.4056/sigs.1373474
Han C, Gu W, Zhang X, Lapidus A, Nolan M, Copeland A, Lucas S, Del Rio TG, Tice H, Cheng JF, Tapia R, Goodwin L, Pitluck S, Pagani I, Ivanova N, Mavromatis K, Mikhailova N, Pati A, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Schneider S, Rohde M, Göker M, Pukall R, Woyke T, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Detter JC. Complete genome sequence of Thermaerobacter marianensis type strain (7p75a). Stand Genomic Sci. 2010 Dec 15;3(3):337-45. doi: 10.4056/sigs.1373474. PMID: 21304738; PMCID: PMC3035304.
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Complete genome sequence of Vulcanisaeta distributa type strain (IC-017).

Standards in genomic sciences

Mavromatis K, Sikorski J, Pabst E, Teshima H, Lapidus A, Lucas S, Nolan M, Glavina Del Rio T, Cheng JF, Bruce D, Goodwin L, Pitluck S, Liolios K, Ivanova N, Mikhailova N, Pati A, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Rohde M, Spring S, Göker M, Wirth R, Woyke T, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Klenk HP, Kyrpides NC.
PMID: 21304741
Stand Genomic Sci. 2010 Sep 28;3(2):117-25. doi: 10.4056/sigs.1113067.

Vulcanisaeta distributa Itoh et al. 2002 belongs to the family Thermoproteaceae in the phylum Crenarchaeota. The genus Vulcanisaeta is characterized by a global distribution in hot and acidic springs. This is the first genome sequence from a member of...

Cite
Mavromatis K, Sikorski J, Pabst E, et al. Complete genome sequence of Vulcanisaeta distributa type strain (IC-017). Stand Genomic Sci. 2010;3(2):117-25doi: 10.4056/sigs.1113067.
Mavromatis, K., Sikorski, J., Pabst, E., Teshima, H., Lapidus, A., Lucas, S., Nolan, M., Glavina Del Rio, T., Cheng, J. F., Bruce, D., Goodwin, L., Pitluck, S., Liolios, K., Ivanova, N., Mikhailova, N., Pati, A., Chen, A., Palaniappan, K., Land, M., Hauser, L., Chang, Y. J., Jeffries, C. D., Rohde, M., Spring, S., Göker, M., Wirth, R., Woyke, T., Bristow, J., Eisen, J. A., Markowitz, V., Hugenholtz, P., Klenk, H. P., & Kyrpides, N. C. (2010). Complete genome sequence of Vulcanisaeta distributa type strain (IC-017). Standards in genomic sciences, 3(2), 117-25. https://doi.org/10.4056/sigs.1113067
Mavromatis, Konstantinos, et al. "Complete genome sequence of Vulcanisaeta distributa type strain (IC-017)." Standards in genomic sciences vol. 3,2 (2010): 117-25. doi: https://doi.org/10.4056/sigs.1113067
Mavromatis K, Sikorski J, Pabst E, Teshima H, Lapidus A, Lucas S, Nolan M, Glavina Del Rio T, Cheng JF, Bruce D, Goodwin L, Pitluck S, Liolios K, Ivanova N, Mikhailova N, Pati A, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Rohde M, Spring S, Göker M, Wirth R, Woyke T, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Klenk HP, Kyrpides NC. Complete genome sequence of Vulcanisaeta distributa type strain (IC-017). Stand Genomic Sci. 2010 Sep 28;3(2):117-25. doi: 10.4056/sigs.1113067. PMID: 21304741; PMCID: PMC3035369.
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