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Targeted alignment and end repair elimination increase alignment and methylation measure accuracy for reduced representation bisulfite sequencing data

pipeline programs

Baheti S, Kanwar R.
GSID: NfVSroXD87IJ
S Baheti, R Kanwar… - BMC …, 2016 - bmcgenomics.biomedcentral.com

DNA methylation is an important epigenetic modification involved in many biological processes. Reduced representation bisulfite sequencing (RRBS) is a cost-effective method …

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Baheti, S., Kanwar, R., Goelzenleuchter, M., Kocher, J. P. A., Beutler, A. S., & Sun, Z. (2016). Targeted alignment and end repair elimination increase alignment and methylation measure accuracy for reduced representation bisulfite sequencing data. BMC genomics, 17(1), 1-8.
Baheti, Saurabh, et al. "Targeted alignment and end repair elimination increase alignment and methylation measure accuracy for reduced representation bisulfite sequencing data." BMC genomics 17.1 (2016): 1-8.
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Pengaruh Penggunaan Model Pembelajaran Assure Terhadap Peningkatan Prestasi Belajar Ipa Anak Tunalaras Kelas Iv Di Slb E Bhina Putera Surakarta Tahun …

lesson plans

Anwar M.
GSID: OS6mO0f9F4sJ
DW Utami, M Anwar, H Hermawan - JPI (Jurnal Pendidikan …, 2018 - journal.unesa.ac.id

Paper Title (use style: paper title) Page 1 Jurnal Pendidikan Inklusi Volume 2 Nomor 1 Tahun 2018 Halaman: 005-014 e-ISSN: 2580-9806 5 PENGARUH PENGGUNAAN MODEL …

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Utami, D. W., Anwar, M., & Hermawan, H. (2018). Pengaruh Penggunaan Model Pembelajaran Assure Terhadap Peningkatan Prestasi Belajar Ipa Anak Tunalaras Kelas Iv Di Slb E Bhina Putera Surakarta Tahun Ajaran 2017/2018. JPI (Jurnal Pendidikan Inklusi), 2(1), 5-14.
Utami, Destri Wahyu, Mohammad Anwar, and Hermawan Hermawan. "Pengaruh Penggunaan Model Pembelajaran Assure Terhadap Peningkatan Prestasi Belajar Ipa Anak Tunalaras Kelas Iv Di Slb E Bhina Putera Surakarta Tahun Ajaran 2017/2018." JPI (Jurnal Pendidikan Inklusi) 2.1 (2018): 5-14.
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Active teaching strategies and student engagement: A comparison of traditional and non-traditional business students

non-traditional student

Arjomandi A, Seufert JH, Anwar S.
GSID: TJWhPotJL1wJ
A Arjomandi, JH Seufert, MJ O'Brien, S Anwar - 2018 - ro.uow.edu.au

… as" non-traditional". The analysis presented in this paper is based on Kahu's framework for student … An important contribution of this research is to show that non-traditional students …

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Arjomandi, A., Seufert, J. H., O'Brien, M. J., & Anwar, S. (2018). Active teaching strategies and student engagement: A comparison of traditional and non-traditional business students.
Arjomandi, Amir, et al. "Active teaching strategies and student engagement: A comparison of traditional and non-traditional business students." (2018): 120.
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SAAP-RRBS: streamlined analysis and annotation pipeline for reduced representation bisulfite sequencing

pipeline programs

Sun Z, Baheti S, Middha S, Kanwar R, Zhang Y.
GSID: 7X6GWoKIRfsJ
Z Sun, S Baheti, S Middha, R Kanwar, Y Zhang… - …, 2012 - academic.oup.com

… BSMAP version 2.43 is integrated into the pipeline as the default aligner. For RRBS, -D C-CGG option is turned on for RRBSMAP … We have compared RRBSMAP with three other alignment programs using simulated and real data, and...

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Sun, Z., Baheti, S., Middha, S., Kanwar, R., Zhang, Y., Li, X., ... & Kocher, J. P. A. (2012). SAAP-RRBS: streamlined analysis and annotation pipeline for reduced representation bisulfite sequencing. Bioinformatics, 28(16), 2180-2181.
Sun, Zhifu, et al. "SAAP-RRBS: streamlined analysis and annotation pipeline for reduced representation bisulfite sequencing." Bioinformatics 28.16 (2012): 2180-2181.
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The Effectiveness of STEM learning: scientific attitudes and students' conceptual understanding

STEM and gender

Anwar C, Saregar A, Thahir A.
GSID: OuxpnWZ4gLkJ
A Thahir, C Anwar, A Saregar, L Choiriah… - Journal of Physics …, 2020 - iopscience.iop.org

… Although there exists a lot of research on the use of the STEM approach, the difference … understanding, and the application of the STEM approach on the momentum and impulses …

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Thahir, A., Anwar, C., Saregar, A., Choiriah, L., Susanti, F., & Pricilia, A. (2020, February). The Effectiveness of STEM learning: scientific attitudes and students’ conceptual understanding. In Journal of Physics: Conference Series (Vol. 1467, No. 1, p. 012008). IOP Publishing.
Thahir, Andi, et al. "The Effectiveness of STEM learning: scientific attitudes and students’ conceptual understanding." Journal of Physics: Conference Series. Vol. 1467. No. 1. IOP Publishing, 2020.
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Dendritic diameters affect the spatial variability of intracellular calcium dynamics in computer models.

Frontiers in cellular neuroscience

Anwar H, Roome CJ, Nedelescu H, Chen W, Kuhn B, De Schutter E.
PMID: 25100945
Front Cell Neurosci. 2014 Jul 23;8:168. doi: 10.3389/fncel.2014.00168. eCollection 2014.

There is growing interest in understanding calcium dynamics in dendrites, both experimentally and computationally. Many processes influence these dynamics, but in dendrites there is a strong contribution of morphology because the peak calcium levels are strongly determined by the...

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Anwar H, Roome CJ, Nedelescu H, et al. Dendritic diameters affect the spatial variability of intracellular calcium dynamics in computer models. Front Cell Neurosci. 2014;8:168doi: 10.3389/fncel.2014.00168.
Anwar, H., Roome, C. J., Nedelescu, H., Chen, W., Kuhn, B., & De Schutter, E. (2014). Dendritic diameters affect the spatial variability of intracellular calcium dynamics in computer models. Frontiers in cellular neuroscience, 8168. https://doi.org/10.3389/fncel.2014.00168
Anwar, Haroon, et al. "Dendritic diameters affect the spatial variability of intracellular calcium dynamics in computer models." Frontiers in cellular neuroscience vol. 8 (2014): 168. doi: https://doi.org/10.3389/fncel.2014.00168
Anwar H, Roome CJ, Nedelescu H, Chen W, Kuhn B, De Schutter E. Dendritic diameters affect the spatial variability of intracellular calcium dynamics in computer models. Front Cell Neurosci. 2014 Jul 23;8:168. doi: 10.3389/fncel.2014.00168. eCollection 2014. PMID: 25100945; PMCID: PMC4107854.
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Pluripotent stem cells to hepatocytes, the journey so far.

Biomedical reports

Palakkan AA, Nanda J, Ross JA.
PMID: 28413633
Biomed Rep. 2017 Apr;6(4):367-373. doi: 10.3892/br.2017.867. Epub 2017 Mar 01.

Over the past several years, there has been substantial progress in the field of regenerative medicine, which has enabled new possibilities for research and clinical application. For example, there are ongoing efforts directed at generating functional hepatocytes from adult-derived...

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Palakkan AA, Nanda J, Ross JA. Pluripotent stem cells to hepatocytes, the journey so far. Biomed Rep. 2017;6(4):367-373doi: 10.3892/br.2017.867.
Palakkan, A. A., Nanda, J., & Ross, J. A. (2017). Pluripotent stem cells to hepatocytes, the journey so far. Biomedical reports, 6(4), 367-373. https://doi.org/10.3892/br.2017.867
Palakkan, Anwar A, et al. "Pluripotent stem cells to hepatocytes, the journey so far." Biomedical reports vol. 6,4 (2017): 367-373. doi: https://doi.org/10.3892/br.2017.867
Palakkan AA, Nanda J, Ross JA. Pluripotent stem cells to hepatocytes, the journey so far. Biomed Rep. 2017 Apr;6(4):367-373. doi: 10.3892/br.2017.867. Epub 2017 Mar 01. PMID: 28413633; PMCID: PMC5374940.
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Evolutionary journey of the Gc protein (vitamin D-binding protein) across vertebrates.

Intrinsically disordered proteins

Anwar S, Iqbal MP, Zarina S, Bhutta ZA.
PMID: 28516027
Intrinsically Disord Proteins. 2014 Jan 01;1(1):e27450. doi: 10.4161/idp.27450. eCollection 2013.

With so many diverse functions such as transporter of vitamin D metabolites and fatty acids, actin scavenger and macrophage activating factor, Gc must have been one of the most conserved proteins in animal kingdom. Our objective was to investigate...

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Anwar S, Iqbal MP, Zarina S, et al. Evolutionary journey of the Gc protein (vitamin D-binding protein) across vertebrates. Intrinsically Disord Proteins. 2014;1(1):e27450doi: 10.4161/idp.27450.
Anwar, S., Iqbal, M. P., Zarina, S., & Bhutta, Z. A. (2013). Evolutionary journey of the Gc protein (vitamin D-binding protein) across vertebrates. Intrinsically disordered proteins, 1(1), e27450. https://doi.org/10.4161/idp.27450
Anwar, Shaheena, et al. "Evolutionary journey of the Gc protein (vitamin D-binding protein) across vertebrates." Intrinsically disordered proteins vol. 1,1 (2013): e27450. doi: https://doi.org/10.4161/idp.27450
Anwar S, Iqbal MP, Zarina S, Bhutta ZA. Evolutionary journey of the Gc protein (vitamin D-binding protein) across vertebrates. Intrinsically Disord Proteins. 2014 Jan 01;1(1):e27450. doi: 10.4161/idp.27450. eCollection 2013. PMID: 28516027; PMCID: PMC5424798.
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Erratum to: Are interventions to promote healthy eating equally effective for all? Systematic review of socioeconomic inequalities in impact.

BMC public health

McGill R, Anwar E, Orton L, Bromley H, Lloyd-Williams F, O'Flaherty M, Taylor-Robinson D, Guzman-Castillo M, Gillespie D, Moreira P, Allen K, Hyseni L, Calder N, Petticrew M, White M, Whitehead M, Capewell S.
PMID: 26373840
BMC Public Health. 2015 Sep 15;15:894. doi: 10.1186/s12889-015-2162-y.

No abstract available.

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McGill R, Anwar E, Orton L, et al. Erratum to: Are interventions to promote healthy eating equally effective for all? Systematic review of socioeconomic inequalities in impact. BMC Public Health. 2015;15:894doi: 10.1186/s12889-015-2162-y.
McGill, R., Anwar, E., Orton, L., Bromley, H., Lloyd-Williams, F., O'Flaherty, M., Taylor-Robinson, D., Guzman-Castillo, M., Gillespie, D., Moreira, P., Allen, K., Hyseni, L., Calder, N., Petticrew, M., White, M., Whitehead, M., & Capewell, S. (2015). Erratum to: Are interventions to promote healthy eating equally effective for all? Systematic review of socioeconomic inequalities in impact. BMC public health, 15894. https://doi.org/10.1186/s12889-015-2162-y
McGill, Rory, et al. "Erratum to: Are interventions to promote healthy eating equally effective for all? Systematic review of socioeconomic inequalities in impact." BMC public health vol. 15 (2015): 894. doi: https://doi.org/10.1186/s12889-015-2162-y
McGill R, Anwar E, Orton L, Bromley H, Lloyd-Williams F, O'Flaherty M, Taylor-Robinson D, Guzman-Castillo M, Gillespie D, Moreira P, Allen K, Hyseni L, Calder N, Petticrew M, White M, Whitehead M, Capewell S. Erratum to: Are interventions to promote healthy eating equally effective for all? Systematic review of socioeconomic inequalities in impact. BMC Public Health. 2015 Sep 15;15:894. doi: 10.1186/s12889-015-2162-y. PMID: 26373840; PMCID: PMC4571134.
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Enantioselective Synthesis of 1,2-Dihydronaphthalenes via Oxidative N-Heterocyclic Carbene Catalysis.

Organic letters

Perveen S, Zhao Z, Zhang G, Liu J, Anwar M, Fang X.
PMID: 28485600
Org Lett. 2017 May 19;19(10):2470-2473. doi: 10.1021/acs.orglett.7b00555. Epub 2017 May 09.

1,2-Dihydronaphthalenes are important molecules in both medicinal and synthetic chemistry, but methods for the catalytic asymmetric construction of this class of molecules are limited. The diastereo- and enantioselective N-heterocyclic carbene-catalyzed cascade annulation reactions using benzodiketones and enals under oxidative...

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Perveen S, Zhao Z, Zhang G, et al. Enantioselective Synthesis of 1,2-Dihydronaphthalenes via Oxidative N-Heterocyclic Carbene Catalysis. Org Lett. 2017;19(10):2470-2473doi: 10.1021/acs.orglett.7b00555.
Perveen, S., Zhao, Z., Zhang, G., Liu, J., Anwar, M., & Fang, X. (2017). Enantioselective Synthesis of 1,2-Dihydronaphthalenes via Oxidative N-Heterocyclic Carbene Catalysis. Organic letters, 19(10), 2470-2473. https://doi.org/10.1021/acs.orglett.7b00555
Perveen, Saima, et al. "Enantioselective Synthesis of 1,2-Dihydronaphthalenes via Oxidative N-Heterocyclic Carbene Catalysis." Organic letters vol. 19,10 (2017): 2470-2473. doi: https://doi.org/10.1021/acs.orglett.7b00555
Perveen S, Zhao Z, Zhang G, Liu J, Anwar M, Fang X. Enantioselective Synthesis of 1,2-Dihydronaphthalenes via Oxidative N-Heterocyclic Carbene Catalysis. Org Lett. 2017 May 19;19(10):2470-2473. doi: 10.1021/acs.orglett.7b00555. Epub 2017 May 09. PMID: 28485600.
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Follicular Thyroid Carcinoma Presenting With Endobronchial Metastases: Case Report and Review of Literature.

Journal of investigative medicine high impact case reports

Onyeaso NC, Gosmanov AR.
PMID: 26425617
J Investig Med High Impact Case Rep. 2014 Jul 16;2(3):2324709614543691. doi: 10.1177/2324709614543691. eCollection 2014.

Endobronchial metastasis is a rare manifestation of differentiated thyroid cancer. A 79-year-old male was admitted to the hospital with shortness of breath, chest pain, anemia, and weight loss. Computed tomography of chest revealed multiple lung nodules. Bronchoscopy showed an...

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Onyeaso NC, Gosmanov AR. Follicular Thyroid Carcinoma Presenting With Endobronchial Metastases: Case Report and Review of Literature. J Investig Med High Impact Case Rep. 2014;2(3):2324709614543691doi: 10.1177/2324709614543691.
Onyeaso, N. C., & Gosmanov, A. R. (2014). Follicular Thyroid Carcinoma Presenting With Endobronchial Metastases: Case Report and Review of Literature. Journal of investigative medicine high impact case reports, 2(3), 2324709614543691. https://doi.org/10.1177/2324709614543691
Onyeaso, Nduche Chika, and Gosmanov, Aidar R. "Follicular Thyroid Carcinoma Presenting With Endobronchial Metastases: Case Report and Review of Literature." Journal of investigative medicine high impact case reports vol. 2,3 (2014): 2324709614543691. doi: https://doi.org/10.1177/2324709614543691
Onyeaso NC, Gosmanov AR. Follicular Thyroid Carcinoma Presenting With Endobronchial Metastases: Case Report and Review of Literature. J Investig Med High Impact Case Rep. 2014 Jul 16;2(3):2324709614543691. doi: 10.1177/2324709614543691. eCollection 2014. PMID: 26425617; PMCID: PMC4528904.
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Work, gender roles, and health: neglected mental health issues among female workers in the ready-made garment industry in Bangladesh.

International journal of women's health

Akhter S, Rutherford S, Akhter Kumkum F, Bromwich D, Anwar I, Rahman A, Chu C.
PMID: 28860866
Int J Womens Health. 2017 Aug 16;9:571-579. doi: 10.2147/IJWH.S137250. eCollection 2017.

BACKGROUND: Traditionally, women in Bangladesh stayed at home in their role as daughter, wife, or mother. In the 1980s, economic reforms created a job market for poor, uneducated rural women in the ready-made garment industry, mostly located in urban...

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Akhter S, Rutherford S, Akhter Kumkum F, et al. Work, gender roles, and health: neglected mental health issues among female workers in the ready-made garment industry in Bangladesh. Int J Womens Health. 2017;9:571-579doi: 10.2147/IJWH.S137250.
Akhter, S., Rutherford, S., Akhter Kumkum, F., Bromwich, D., Anwar, I., Rahman, A., & Chu, C. (2017). Work, gender roles, and health: neglected mental health issues among female workers in the ready-made garment industry in Bangladesh. International journal of women's health, 9571-579. https://doi.org/10.2147/IJWH.S137250
Akhter, Sadika, et al. "Work, gender roles, and health: neglected mental health issues among female workers in the ready-made garment industry in Bangladesh." International journal of women's health vol. 9 (2017): 571-579. doi: https://doi.org/10.2147/IJWH.S137250
Akhter S, Rutherford S, Akhter Kumkum F, Bromwich D, Anwar I, Rahman A, Chu C. Work, gender roles, and health: neglected mental health issues among female workers in the ready-made garment industry in Bangladesh. Int J Womens Health. 2017 Aug 16;9:571-579. doi: 10.2147/IJWH.S137250. eCollection 2017. PMID: 28860866; PMCID: PMC5566390.
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Showing 1 to 12 of 1346 entries