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Awareness seeds for more gender diversity in computer science education

Science and underrepresentation

Bartilla A, Köppe C.
GSID: FD_hXs9VdGgJ
A Bartilla, C Köppe - Proceedings of the 20th European Conference on …, 2015 - dl.acm.org

Computer Science is still not a very diverse field, it is mainly male-dominated. The picture in Computer Science Education is not much better. In the Netherlands, only 4-5% of the CS …

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Bartilla, A., & Köppe, C. (2015, July). Awareness seeds for more gender diversity in computer science education. In Proceedings of the 20th European Conference on Pattern Languages of Programs (pp. 1-11).
Bartilla, Anne, and Christian Köppe. "Awareness seeds for more gender diversity in computer science education." Proceedings of the 20th European Conference on Pattern Languages of Programs. 2015.
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Erratum to: Conversion of Uric Acid into Ammonium in Oil-Degrading Marine Microbial Communities: a Possible Role of Halomonads.

Microbial ecology

Gertler C, Bargiela R, Mapelli F, Han X, Chen J, Hai T, Amer RA, Mahjoubi M, Malkawi H, Magagnini M, Cherif A, Abdel-Fattah YR, Kalogerakis N, Daffonchio D, Ferrer M, Golyshin PN.
PMID: 26066513
Microb Ecol. 2015 Nov;70(4):1034. doi: 10.1007/s00248-015-0631-6.

No abstract available.

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Gertler C, Bargiela R, Mapelli F, et al. Erratum to: Conversion of Uric Acid into Ammonium in Oil-Degrading Marine Microbial Communities: a Possible Role of Halomonads. Microb Ecol. 2015;70(4):1034doi: 10.1007/s00248-015-0631-6.
Gertler, C., Bargiela, R., Mapelli, F., Han, X., Chen, J., Hai, T., Amer, R. A., Mahjoubi, M., Malkawi, H., Magagnini, M., Cherif, A., Abdel-Fattah, Y. R., Kalogerakis, N., Daffonchio, D., Ferrer, M., & Golyshin, P. N. (2015). Erratum to: Conversion of Uric Acid into Ammonium in Oil-Degrading Marine Microbial Communities: a Possible Role of Halomonads. Microbial ecology, 70(4), 1034. https://doi.org/10.1007/s00248-015-0631-6
Gertler, Christoph, et al. "Erratum to: Conversion of Uric Acid into Ammonium in Oil-Degrading Marine Microbial Communities: a Possible Role of Halomonads." Microbial ecology vol. 70,4 (2015): 1034. doi: https://doi.org/10.1007/s00248-015-0631-6
Gertler C, Bargiela R, Mapelli F, Han X, Chen J, Hai T, Amer RA, Mahjoubi M, Malkawi H, Magagnini M, Cherif A, Abdel-Fattah YR, Kalogerakis N, Daffonchio D, Ferrer M, Golyshin PN. Erratum to: Conversion of Uric Acid into Ammonium in Oil-Degrading Marine Microbial Communities: a Possible Role of Halomonads. Microb Ecol. 2015 Nov;70(4):1034. doi: 10.1007/s00248-015-0631-6. PMID: 26066513.
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Mitochondrial pathology in progressive cerebellar ataxia.

Cerebellum & ataxias

Bargiela D, Shanmugarajah P, Lo C, Blakely EL, Taylor RW, Horvath R, Wharton S, Chinnery PF, Hadjivassiliou M.
PMID: 26640698
Cerebellum Ataxias. 2015 Dec 04;2:16. doi: 10.1186/s40673-015-0035-x. eCollection 2015.

BACKGROUND: Mitochondrial disease can manifest as multi-organ disorder, often with neurological dysfunction. Cerebellar ataxia in isolation or in combination with other features can result from mitochondrial disease yet genetic testing using blood DNA is not sufficient to exclude this...

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Bargiela D, Shanmugarajah P, Lo C, et al. Mitochondrial pathology in progressive cerebellar ataxia. Cerebellum Ataxias. 2015;2:16doi: 10.1186/s40673-015-0035-x.
Bargiela, D., Shanmugarajah, P., Lo, C., Blakely, E. L., Taylor, R. W., Horvath, R., Wharton, S., Chinnery, P. F., & Hadjivassiliou, M. (2015). Mitochondrial pathology in progressive cerebellar ataxia. Cerebellum & ataxias, 216. https://doi.org/10.1186/s40673-015-0035-x
Bargiela, David, et al. "Mitochondrial pathology in progressive cerebellar ataxia." Cerebellum & ataxias vol. 2 (2015): 16. doi: https://doi.org/10.1186/s40673-015-0035-x
Bargiela D, Shanmugarajah P, Lo C, Blakely EL, Taylor RW, Horvath R, Wharton S, Chinnery PF, Hadjivassiliou M. Mitochondrial pathology in progressive cerebellar ataxia. Cerebellum Ataxias. 2015 Dec 04;2:16. doi: 10.1186/s40673-015-0035-x. eCollection 2015. PMID: 26640698; PMCID: PMC4670505.
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Spontaneous Regression of a Carcinoid Tumor following Pregnancy.

Case reports in endocrinology

Sewpaul A, Bargiela D, James A, Johnson SJ, French JJ.
PMID: 25587468
Case Rep Endocrinol. 2014;2014:481823. doi: 10.1155/2014/481823. Epub 2014 Dec 21.

We present a case of spontaneous regression of a neuroendocrine tumor following pregnancy in the absence of chemotherapy, radiotherapy, or alternative medicine (including herbal medicine). The diagnosis of a nonsecretory carcinoid tumor was confirmed using CT imaging, octreotide scan,...

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Sewpaul A, Bargiela D, James A, et al. Spontaneous Regression of a Carcinoid Tumor following Pregnancy. Case Rep Endocrinol. 2014;2014:481823doi: 10.1155/2014/481823.
Sewpaul, A., Bargiela, D., James, A., Johnson, S. J., & French, J. J. (2014). Spontaneous Regression of a Carcinoid Tumor following Pregnancy. Case reports in endocrinology, 2014481823. https://doi.org/10.1155/2014/481823
Sewpaul, A, et al. "Spontaneous Regression of a Carcinoid Tumor following Pregnancy." Case reports in endocrinology vol. 2014 (2014): 481823. doi: https://doi.org/10.1155/2014/481823
Sewpaul A, Bargiela D, James A, Johnson SJ, French JJ. Spontaneous Regression of a Carcinoid Tumor following Pregnancy. Case Rep Endocrinol. 2014;2014:481823. doi: 10.1155/2014/481823. Epub 2014 Dec 21. PMID: 25587468; PMCID: PMC4283420.
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General fuzzy min-max neural network for clustering and classification.

IEEE transactions on neural networks

Gabrys B, Bargiela A.
PMID: 18249803
IEEE Trans Neural Netw. 2000;11(3):769-83. doi: 10.1109/72.846747.

This paper describes a general fuzzy min-max (GFMM) neural network which is a generalization and extension of the fuzzy min-max clustering and classification algorithms developed by Simpson. The GFMM method combines the supervised and unsupervised learning within a single...

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Gabrys B, Bargiela A. General fuzzy min-max neural network for clustering and classification. IEEE Trans Neural Netw. 2000;11(3):769-83doi: 10.1109/72.846747.
Gabrys, B., & Bargiela, A. (2000). General fuzzy min-max neural network for clustering and classification. IEEE transactions on neural networks, 11(3), 769-83. https://doi.org/10.1109/72.846747
Gabrys, B, and Bargiela, A. "General fuzzy min-max neural network for clustering and classification." IEEE transactions on neural networks vol. 11,3 (2000): 769-83. doi: https://doi.org/10.1109/72.846747
Gabrys B, Bargiela A. General fuzzy min-max neural network for clustering and classification. IEEE Trans Neural Netw. 2000;11(3):769-83. doi: 10.1109/72.846747. PMID: 18249803.
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Comparison of different permanent chemical modifiers for lead determination in Orujo spirits by electrothermal atomic absorption spectrometry.

Talanta

Vilar M, Barciela J, García-Martín S, Peña RM, Herrero C.
PMID: 19071501
Talanta. 2007 Mar 15;71(4):1629-36. doi: 10.1016/j.talanta.2006.07.045. Epub 2006 Aug 28.

Different analytical methods for the determination of lead in Orujo spirits by electrothermal atomic absorption spectrometry (ETAAS) were developed using permanent modifiers (W, Ir, Ru, W-Ir and W-Ru) thermally deposited on platforms inserted in pyrolitic graphite tubes and Pd-Mg(NO(3))(2)...

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Vilar M, Barciela J, García-Martín S, et al. Comparison of different permanent chemical modifiers for lead determination in Orujo spirits by electrothermal atomic absorption spectrometry. Talanta. 2006;71(4):1629-36doi: 10.1016/j.talanta.2006.07.045.
Vilar, M., Barciela, J., García-Martín, S., Peña, R. M., & Herrero, C. (2007). Comparison of different permanent chemical modifiers for lead determination in Orujo spirits by electrothermal atomic absorption spectrometry. Talanta, 71(4), 1629-36. https://doi.org/10.1016/j.talanta.2006.07.045
Vilar, M, et al. "Comparison of different permanent chemical modifiers for lead determination in Orujo spirits by electrothermal atomic absorption spectrometry." Talanta vol. 71,4 (2007): 1629-36. doi: https://doi.org/10.1016/j.talanta.2006.07.045
Vilar M, Barciela J, García-Martín S, Peña RM, Herrero C. Comparison of different permanent chemical modifiers for lead determination in Orujo spirits by electrothermal atomic absorption spectrometry. Talanta. 2007 Mar 15;71(4):1629-36. doi: 10.1016/j.talanta.2006.07.045. Epub 2006 Aug 28. PMID: 19071501.
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Proteomic Analysis of Methanonatronarchaeum thermophilum AMET1, a Representative of a Putative New Class of Euryarchaeota, "Methanonatronarchaeia".

Genes

Ferrer M, Sorokin DY, Wolf YI, Ciordia S, Mena MC, Bargiela R, Koonin EV, Makarova KS.
PMID: 29360740
Genes (Basel). 2018 Jan 23;9(2). doi: 10.3390/genes9020028.

The recently discovered Methanonatronarchaeia are extremely halophilic and moderately thermophilic methyl-reducing methanogens representing a novel class-level lineage in the phylum Euryarchaeota related to the class Halobacteria. Here we present a detailed analysis of 1D-nano liquid chromatography-electrospray ionization tandem mass...

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Ferrer M, Sorokin DY, Wolf YI, et al. Proteomic Analysis of Methanonatronarchaeum thermophilum AMET1, a Representative of a Putative New Class of Euryarchaeota, "Methanonatronarchaeia". Genes (Basel). 2018;9(2)doi: 10.3390/genes9020028.
Ferrer, M., Sorokin, D. Y., Wolf, Y. I., Ciordia, S., Mena, M. C., Bargiela, R., Koonin, E. V., & Makarova, K. S. (2018). Proteomic Analysis of Methanonatronarchaeum thermophilum AMET1, a Representative of a Putative New Class of Euryarchaeota, "Methanonatronarchaeia". Genes, 9(2), . https://doi.org/10.3390/genes9020028
Ferrer, Manuel, et al. "Proteomic Analysis of Methanonatronarchaeum thermophilum AMET1, a Representative of a Putative New Class of Euryarchaeota, "Methanonatronarchaeia"." Genes vol. 9,2 (2018). doi: https://doi.org/10.3390/genes9020028
Ferrer M, Sorokin DY, Wolf YI, Ciordia S, Mena MC, Bargiela R, Koonin EV, Makarova KS. Proteomic Analysis of Methanonatronarchaeum thermophilum AMET1, a Representative of a Putative New Class of Euryarchaeota, "Methanonatronarchaeia". Genes (Basel). 2018 Jan 23;9(2). doi: 10.3390/genes9020028. PMID: 29360740; PMCID: PMC5852551.
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Utility of endoscopic ultrasound-guided fine-needle aspiration of regional lymph nodes that are proximal to and far from the primary distal esophageal carcinoma.

Oncotarget

Shimodaira Y, Slack RS, Harada K, Bhutani MS, Elimova E, Staerkel GA, Sneige N, Erasmus J, Shiozaki H, Charalampakis N, Planjery V, Kaya DM, Amlashi FG, Blum MA, Skinner HD, Minsky BD, Maru DM, Hofstetter WL, Swisher SG, Mares JE, Rogers JE, Lin QD, Ross WA, Weston B, Lee JH, Ajani JA.
PMID: 29108314
Oncotarget. 2017 May 23;8(45):79356-79365. doi: 10.18632/oncotarget.18119. eCollection 2017 Oct 03.

Implications of assessing the proximal and far para-tracheal or sub-carinal nodes (para-tracheal [PTN] or sub-carinal [SCN]) associated with lower primary esophageal carcinomas (ECs) are unclear. To evaluate the value of endoscopic ultrasound guided fine-needle aspiration (EUS-FNA) for PTN and...

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Shimodaira Y, Slack RS, Harada K, et al. Utility of endoscopic ultrasound-guided fine-needle aspiration of regional lymph nodes that are proximal to and far from the primary distal esophageal carcinoma. Oncotarget. 2017;8(45):79356-79365doi: 10.18632/oncotarget.18119.
Shimodaira, Y., Slack, R. S., Harada, K., Bhutani, M. S., Elimova, E., Staerkel, G. A., Sneige, N., Erasmus, J., Shiozaki, H., Charalampakis, N., Planjery, V., Kaya, D. M., Amlashi, F. G., Blum, M. A., Skinner, H. D., Minsky, B. D., Maru, D. M., Hofstetter, W. L., Swisher, S. G., Mares, J. E., Rogers, J. E., Lin, Q. D., Ross, W. A., Weston, B., Lee, J. H., & Ajani, J. A. (2017). Utility of endoscopic ultrasound-guided fine-needle aspiration of regional lymph nodes that are proximal to and far from the primary distal esophageal carcinoma. Oncotarget, 8(45), 79356-79365. https://doi.org/10.18632/oncotarget.18119
Shimodaira, Yusuke, et al. "Utility of endoscopic ultrasound-guided fine-needle aspiration of regional lymph nodes that are proximal to and far from the primary distal esophageal carcinoma." Oncotarget vol. 8,45 (2017): 79356-79365. doi: https://doi.org/10.18632/oncotarget.18119
Shimodaira Y, Slack RS, Harada K, Bhutani MS, Elimova E, Staerkel GA, Sneige N, Erasmus J, Shiozaki H, Charalampakis N, Planjery V, Kaya DM, Amlashi FG, Blum MA, Skinner HD, Minsky BD, Maru DM, Hofstetter WL, Swisher SG, Mares JE, Rogers JE, Lin QD, Ross WA, Weston B, Lee JH, Ajani JA. Utility of endoscopic ultrasound-guided fine-needle aspiration of regional lymph nodes that are proximal to and far from the primary distal esophageal carcinoma. Oncotarget. 2017 May 23;8(45):79356-79365. doi: 10.18632/oncotarget.18119. eCollection 2017 Oct 03. PMID: 29108314; PMCID: PMC5668047.
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Normal menstrual cycle steroid hormones variation does not affect the blood levels of total adiponectin and its multimer forms.

Journal of clinical & translational endocrinology

Chatzidimitriou K, Gougoura SG, Bargiota A, Koukoulis GN.
PMID: 29159111
J Clin Transl Endocrinol. 2015 Mar 18;2(2):61-65. doi: 10.1016/j.jcte.2015.03.001. eCollection 2015 Jun.

OBJECTIVE: Plasma total adiponectin reveals a sexual dimorphism indicating that gonadal steroids may be involved in its secretion and/or metabolism. However, results from previous reports are conflicting and data regarding the influence of ovarian steroids on adiponectin's multimer forms...

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Chatzidimitriou K, Gougoura SG, Bargiota A, et al. Normal menstrual cycle steroid hormones variation does not affect the blood levels of total adiponectin and its multimer forms. J Clin Transl Endocrinol. 2015;2(2):61-65doi: 10.1016/j.jcte.2015.03.001.
Chatzidimitriou, K., Gougoura, S. G., Bargiota, A., & Koukoulis, G. N. (2015). Normal menstrual cycle steroid hormones variation does not affect the blood levels of total adiponectin and its multimer forms. Journal of clinical & translational endocrinology, 2(2), 61-65. https://doi.org/10.1016/j.jcte.2015.03.001
Chatzidimitriou, Konstantia, et al. "Normal menstrual cycle steroid hormones variation does not affect the blood levels of total adiponectin and its multimer forms." Journal of clinical & translational endocrinology vol. 2,2 (2015): 61-65. doi: https://doi.org/10.1016/j.jcte.2015.03.001
Chatzidimitriou K, Gougoura SG, Bargiota A, Koukoulis GN. Normal menstrual cycle steroid hormones variation does not affect the blood levels of total adiponectin and its multimer forms. J Clin Transl Endocrinol. 2015 Mar 18;2(2):61-65. doi: 10.1016/j.jcte.2015.03.001. eCollection 2015 Jun. PMID: 29159111; PMCID: PMC5685044.
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Genetic basis of keloid formation in wounds after cardiac surgery.

Kardiochirurgia i torakochirurgia polska = Polish journal of cardio-thoracic surgery

Kulawczuk P, Czapla N, Bińczak-Kuleta A, Safranow K, Jaworska-Kulawczuk A, Gajewska D, Agata K, Brykczyński M, Bargiel P.
PMID: 26336434
Kardiochir Torakochirurgia Pol. 2014 Sep;11(3):273-7. doi: 10.5114/kitp.2014.45676. Epub 2014 Sep 28.

Keloid disease is the abnormal formation of scar tissue in genetically predisposed people. Among many genes which may be related to the development of keloids, transforming growth factor β1 (TGF-β1) is one of the most mentioned. It encodes cytokinin,...

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Kulawczuk P, Czapla N, Bińczak-Kuleta A, et al. Genetic basis of keloid formation in wounds after cardiac surgery. Kardiochir Torakochirurgia Pol. 2014;11(3):273-7doi: 10.5114/kitp.2014.45676.
Kulawczuk, P., Czapla, N., Bińczak-Kuleta, A., Safranow, K., Jaworska-Kulawczuk, A., Gajewska, D., Agata, K., Brykczyński, M., & Bargiel, P. (2014). Genetic basis of keloid formation in wounds after cardiac surgery. Kardiochirurgia i torakochirurgia polska = Polish journal of cardio-thoracic surgery, 11(3), 273-7. https://doi.org/10.5114/kitp.2014.45676
Kulawczuk, Przemysław, et al. "Genetic basis of keloid formation in wounds after cardiac surgery." Kardiochirurgia i torakochirurgia polska = Polish journal of cardio-thoracic surgery vol. 11,3 (2014): 273-7. doi: https://doi.org/10.5114/kitp.2014.45676
Kulawczuk P, Czapla N, Bińczak-Kuleta A, Safranow K, Jaworska-Kulawczuk A, Gajewska D, Agata K, Brykczyński M, Bargiel P. Genetic basis of keloid formation in wounds after cardiac surgery. Kardiochir Torakochirurgia Pol. 2014 Sep;11(3):273-7. doi: 10.5114/kitp.2014.45676. Epub 2014 Sep 28. PMID: 26336434; PMCID: PMC4283882.
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Turban Tumor Syndrome: In Search of a Gold Standard - A Case Report.

Skin appendage disorders

Bargiel J, Wyszyńska-Pawelec G, Gontarz M, Gąsiorowski K, Marecik T, Szczurowski P, Zapała J.
PMID: 34307484
Skin Appendage Disord. 2021 Jun;7(4):326-328. doi: 10.1159/000514855. Epub 2021 Mar 30.

Turban tumor syndrome (TTS) is a rare condition characterized by predisposition to developing multiple adnexal tumors. It is the rare autosomal dominant genodermatosis that is associated with the mutation of the CYLD suppressor gene. We herein report rare TTS...

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Bargiel J, Wyszyńska-Pawelec G, Gontarz M, et al. Turban Tumor Syndrome: In Search of a Gold Standard - A Case Report. Skin Appendage Disord. 2021;7(4):326-328doi: 10.1159/000514855.
Bargiel, J., Wyszyńska-Pawelec, G., Gontarz, M., Gąsiorowski, K., Marecik, T., Szczurowski, P., & Zapała, J. (2021). Turban Tumor Syndrome: In Search of a Gold Standard - A Case Report. Skin appendage disorders, 7(4), 326-328. https://doi.org/10.1159/000514855
Bargiel, Jakub, et al. "Turban Tumor Syndrome: In Search of a Gold Standard - A Case Report." Skin appendage disorders vol. 7,4 (2021): 326-328. doi: https://doi.org/10.1159/000514855
Bargiel J, Wyszyńska-Pawelec G, Gontarz M, Gąsiorowski K, Marecik T, Szczurowski P, Zapała J. Turban Tumor Syndrome: In Search of a Gold Standard - A Case Report. Skin Appendage Disord. 2021 Jun;7(4):326-328. doi: 10.1159/000514855. Epub 2021 Mar 30. PMID: 34307484; PMCID: PMC8280440.
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Practicing logical reasoning through Drosophila segmentation gene mutants.

Biochemistry and molecular biology education : a bimonthly publication of the International Union of Biochemistry and Molecular Biology

Bargiela A, Artero R.
PMID: 34160891
Biochem Mol Biol Educ. 2021 Sep;49(5):729-736. doi: 10.1002/bmb.21554. Epub 2021 Jun 23.

Laboratory practical sessions are critical to scientific training in biology but usually fail to promote logical and hypothesis-driven reasoning and rely heavily on the teacher's instructions. This paper describes a 2-day laboratory practicum in which students prepare and analyze...

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Bargiela A, Artero R. Practicing logical reasoning through Drosophila segmentation gene mutants. Biochem Mol Biol Educ. 2021;49(5):729-736doi: 10.1002/bmb.21554.
Bargiela, A., & Artero, R. (2021). Practicing logical reasoning through Drosophila segmentation gene mutants. Biochemistry and molecular biology education : a bimonthly publication of the International Union of Biochemistry and Molecular Biology, 49(5), 729-736. https://doi.org/10.1002/bmb.21554
Bargiela, Ariadna, and Artero, Ruben. "Practicing logical reasoning through Drosophila segmentation gene mutants." Biochemistry and molecular biology education : a bimonthly publication of the International Union of Biochemistry and Molecular Biology vol. 49,5 (2021): 729-736. doi: https://doi.org/10.1002/bmb.21554
Bargiela A, Artero R. Practicing logical reasoning through Drosophila segmentation gene mutants. Biochem Mol Biol Educ. 2021 Sep;49(5):729-736. doi: 10.1002/bmb.21554. Epub 2021 Jun 23. PMID: 34160891.
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