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Study of Meta-analysis strategies for network inference using information-theoretic approaches.

BioData mining

Pham NC, Haibe-Kains B, Bellot P, Bontempi G, Meyer PE.
PMID: 28484519
BioData Min. 2017 May 06;10:15. doi: 10.1186/s13040-017-0136-6. eCollection 2017.

BACKGROUND: Reverse engineering of gene regulatory networks (GRNs) from gene expression data is a classical challenge in systems biology. Thanks to high-throughput technologies, a massive amount of gene-expression data has been accumulated in the public repositories. Modelling GRNs from...

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Pham NC, Haibe-Kains B, Bellot P, et al. Study of Meta-analysis strategies for network inference using information-theoretic approaches. BioData Min. 2017;10:15doi: 10.1186/s13040-017-0136-6.
Pham, N. C., Haibe-Kains, B., Bellot, P., Bontempi, G., & Meyer, P. E. (2017). Study of Meta-analysis strategies for network inference using information-theoretic approaches. BioData mining, 1015. https://doi.org/10.1186/s13040-017-0136-6
Pham, Ngoc C, et al. "Study of Meta-analysis strategies for network inference using information-theoretic approaches." BioData mining vol. 10 (2017): 15. doi: https://doi.org/10.1186/s13040-017-0136-6
Pham NC, Haibe-Kains B, Bellot P, Bontempi G, Meyer PE. Study of Meta-analysis strategies for network inference using information-theoretic approaches. BioData Min. 2017 May 06;10:15. doi: 10.1186/s13040-017-0136-6. eCollection 2017. PMID: 28484519; PMCID: PMC5420410.
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The rising tide of bloodstream infections with Actinomyces species: bimicrobial infection with Actinomyces odontolyticus and Escherichia coli in an intravenous drug user.

Oxford medical case reports

Weiand D, Barlow G.
PMID: 25988064
Oxf Med Case Reports. 2014 Dec 23;2014(9):156-8. doi: 10.1093/omcr/omu059. eCollection 2014 Dec.

Clinicians of all specialties need to be aware of a recent, nationwide increase in the number of Actinomyces bloodstream infections. We report a case of bimicrobial bloodstream infection with Actinomyces odontolyticus and Escherichia coli in an intravenous drug user....

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Weiand D, Barlow G. The rising tide of bloodstream infections with Actinomyces species: bimicrobial infection with Actinomyces odontolyticus and Escherichia coli in an intravenous drug user. Oxf Med Case Reports. 2014;2014(9):156-8doi: 10.1093/omcr/omu059.
Weiand, D., & Barlow, G. (2014). The rising tide of bloodstream infections with Actinomyces species: bimicrobial infection with Actinomyces odontolyticus and Escherichia coli in an intravenous drug user. Oxford medical case reports, 2014(9), 156-8. https://doi.org/10.1093/omcr/omu059
Weiand, Daniel, and Barlow, Gavin. "The rising tide of bloodstream infections with Actinomyces species: bimicrobial infection with Actinomyces odontolyticus and Escherichia coli in an intravenous drug user." Oxford medical case reports vol. 2014,9 (2014): 156-8. doi: https://doi.org/10.1093/omcr/omu059
Weiand D, Barlow G. The rising tide of bloodstream infections with Actinomyces species: bimicrobial infection with Actinomyces odontolyticus and Escherichia coli in an intravenous drug user. Oxf Med Case Reports. 2014 Dec 23;2014(9):156-8. doi: 10.1093/omcr/omu059. eCollection 2014 Dec. PMID: 25988064; PMCID: PMC4370021.
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Bacterioplankton Community Diversity in a Series of Thermally Stratified Lakes.

Microbial ecology

Konopka A, Bercot T, Nakatsu C.
PMID: 10441705
Microb Ecol. 1999 Aug;38(2):126-135. doi: 10.1007/s002489900166.

> Abstract The dominant members of the bacterioplankton community in a set of 10 small, thermally stratified lakes in northeastern Indiana were determined by denaturing gradient gel electrophoresis (DGGE) of a polymerase chain reaction amplified fragment of 16S rDNA....

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Konopka A, Bercot T, Nakatsu C. Bacterioplankton Community Diversity in a Series of Thermally Stratified Lakes. Microb Ecol. 1999;38(2):126-135doi: 10.1007/s002489900166.
Konopka, A., Bercot, T., & Nakatsu, C. (1999). Bacterioplankton Community Diversity in a Series of Thermally Stratified Lakes. Microbial ecology, 38(2), 126-135. https://doi.org/10.1007/s002489900166
Konopka, et al. "Bacterioplankton Community Diversity in a Series of Thermally Stratified Lakes." Microbial ecology vol. 38,2 (1999): 126-135. doi: https://doi.org/10.1007/s002489900166
Konopka A, Bercot T, Nakatsu C. Bacterioplankton Community Diversity in a Series of Thermally Stratified Lakes. Microb Ecol. 1999 Aug;38(2):126-135. doi: 10.1007/s002489900166. PMID: 10441705.
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Preface.

Pediatric pulmonology

Bellon G.
PMID: 10922140
Pediatr Pulmonol. 2000 Aug;30(2):157-8. doi: 10.1002/1099-0496(200008)30:2<157::aid-ppul13>3.0.co;2-p.

No abstract available.

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Bellon G. Preface. Pediatr Pulmonol. 2000;30(2):157-8doi: 10.1002/1099-0496(200008)30:2<157::aid-ppul13>3.0.co;2-p.
Bellon, G. (2000). Preface. Pediatric pulmonology, 30(2), 157-8. https://doi.org/10.1002/1099-0496(200008)30:2<157::aid-ppul13>3.0.co;2-p
Bellon. "Preface." Pediatric pulmonology vol. 30,2 (2000): 157-8. doi: https://doi.org/10.1002/1099-0496(200008)30:2<157::aid-ppul13>3.0.co;2-p
Bellon G. Preface. Pediatr Pulmonol. 2000 Aug;30(2):157-8. doi: 10.1002/1099-0496(200008)30:2<157::aid-ppul13>3.0.co;2-p. PMID: 10922140.
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Advanced practitioners' use of reflexivity in decision-making.

Nursing times

Bellot A.
PMID: 17124835
Nurs Times. 2006 Nov 7-13;102(45):33-4.

This small study provides an insight into the process of clinical decision-making and raises awareness of the role of reflexivity and intuition in expert practice. This is a summary of the paper--the full version can be accessed at: nursingtimes.net.

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Bellot A. Advanced practitioners' use of reflexivity in decision-making. Nurs Times. 2006;102(45):33-4
Bellot, A. (2006). Advanced practitioners' use of reflexivity in decision-making. Nursing times, 102(45), 33-4.
Bellot, Andrea. "Advanced practitioners' use of reflexivity in decision-making." Nursing times vol. 102,45 (2006): 33-4.
Bellot A. Advanced practitioners' use of reflexivity in decision-making. Nurs Times. 2006 Nov 7-13;102(45):33-4. PMID: 17124835.
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[Not Available].

Talanta

Merlot G, Lacroix B, Romon MT, Huvenne JP, Fleury G.
PMID: 18964088
Talanta. 1986 Apr;33(4):299-310. doi: 10.1016/0039-9140(86)80078-9.

To increase the analytical potential of the combination of gas chromatography and Fourier-transform infrared spectrometry, we have adapted our system to use of capillary columns, and automated the acquisition and treatment of the data. The performance of the method...

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Merlot G, Lacroix B, Romon MT, et al. Analyse de melanges complexes sur le couplage chromatographie en phase gazeuse/spectrometrie infrarouge par transformee de fourier equipe de colonnes capillaires. [Not Available]. Talanta. 1986;33(4):299-310doi: 10.1016/0039-9140(86)80078-9.
Merlot, G., Lacroix, B., Romon, M. T., Huvenne, J. P., & Fleury, G. (1986). Analyse de melanges complexes sur le couplage chromatographie en phase gazeuse/spectrometrie infrarouge par transformee de fourier equipe de colonnes capillaires. [Not Available]. Talanta, 33(4), 299-310. https://doi.org/10.1016/0039-9140(86)80078-9
Merlot, G, et al. "Analyse de melanges complexes sur le couplage chromatographie en phase gazeuse/spectrometrie infrarouge par transformee de fourier equipe de colonnes capillaires." [Not Available]. Talanta vol. 33,4 (1986): 299-310. doi: https://doi.org/10.1016/0039-9140(86)80078-9
Merlot G, Lacroix B, Romon MT, Huvenne JP, Fleury G. Analyse de melanges complexes sur le couplage chromatographie en phase gazeuse/spectrometrie infrarouge par transformee de fourier equipe de colonnes capillaires. [Not Available]. Talanta. 1986 Apr;33(4):299-310. doi: 10.1016/0039-9140(86)80078-9. French. PMID: 18964088.
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The Role of Negative-Pressure Wound Therapy in Lower-Limb Reconstruction.

Indian journal of plastic surgery : official publication of the Association of Plastic Surgeons of India

Sirisena R, Bellot GL, Puhaindran ME.
PMID: 31456615
Indian J Plast Surg. 2019 Jan;52(1):73-80. doi: 10.1055/s-0039-1687922. Epub 2019 Apr 16.

Negative-pressure wound therapy (NPWT) has gained increasing popularity among clinicians since its introduction in 1997 as a potential aid to wound healing. Multiple benefits of NPWT have since been proven in studies, including increase in granulation tissue formation, decrease...

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Sirisena R, Bellot GL, Puhaindran ME. The Role of Negative-Pressure Wound Therapy in Lower-Limb Reconstruction. Indian J Plast Surg. 2019;52(1):73-80doi: 10.1055/s-0039-1687922.
Sirisena, R., Bellot, G. L., & Puhaindran, M. E. (2019). The Role of Negative-Pressure Wound Therapy in Lower-Limb Reconstruction. Indian journal of plastic surgery : official publication of the Association of Plastic Surgeons of India, 52(1), 73-80. https://doi.org/10.1055/s-0039-1687922
Sirisena, Renita, et al. "The Role of Negative-Pressure Wound Therapy in Lower-Limb Reconstruction." Indian journal of plastic surgery : official publication of the Association of Plastic Surgeons of India vol. 52,1 (2019): 73-80. doi: https://doi.org/10.1055/s-0039-1687922
Sirisena R, Bellot GL, Puhaindran ME. The Role of Negative-Pressure Wound Therapy in Lower-Limb Reconstruction. Indian J Plast Surg. 2019 Jan;52(1):73-80. doi: 10.1055/s-0039-1687922. Epub 2019 Apr 16. PMID: 31456615; PMCID: PMC6664838.
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Development and impact of a massive open online course (MOOC) for antimicrobial stewardship.

The Journal of antimicrobial chemotherapy

Sneddon J, Barlow G, Bradley S, Brink A, Chandy SJ, Nathwani D.
PMID: 29340600
J Antimicrob Chemother. 2018 Apr 01;73(4):1091-1097. doi: 10.1093/jac/dkx493.

BACKGROUND: The University of Dundee and the BSAC developed a massive open online course (MOOC) to address the global need for education to support antimicrobial stewardship in low- and middle-income countries.METHODS: An interactive course, Antimicrobial Stewardship: Managing Antibiotic Resistance,...

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Sneddon J, Barlow G, Bradley S, et al. Development and impact of a massive open online course (MOOC) for antimicrobial stewardship. J Antimicrob Chemother. 2018;73(4):1091-1097doi: 10.1093/jac/dkx493.
Sneddon, J., Barlow, G., Bradley, S., Brink, A., Chandy, S. J., & Nathwani, D. (2018). Development and impact of a massive open online course (MOOC) for antimicrobial stewardship. The Journal of antimicrobial chemotherapy, 73(4), 1091-1097. https://doi.org/10.1093/jac/dkx493
Sneddon, Jacqueline, et al. "Development and impact of a massive open online course (MOOC) for antimicrobial stewardship." The Journal of antimicrobial chemotherapy vol. 73,4 (2018): 1091-1097. doi: https://doi.org/10.1093/jac/dkx493
Sneddon J, Barlow G, Bradley S, Brink A, Chandy SJ, Nathwani D. Development and impact of a massive open online course (MOOC) for antimicrobial stewardship. J Antimicrob Chemother. 2018 Apr 01;73(4):1091-1097. doi: 10.1093/jac/dkx493. PMID: 29340600.
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Correction to: Effects of the timing of administration of IgM- and IgA-enriched intravenous polyclonal immunoglobulins on the outcome of septic shock patients.

Annals of intensive care

Berlot G, Vassallo MC, Busetto N, Yabar MN, Istrati T, Baronio S, Quarantotto G, Bixio M, Barbati G, Dattola R, Longo I, Chillemi A, Scamperle A, Iscra F, Tomasini A.
PMID: 30838471
Ann Intensive Care. 2019 Mar 05;9(1):33. doi: 10.1186/s13613-019-0504-0.

Following publication of the original article [1], we have been notified that the tagging of the author name was done incorrectly in the XML version of the paper. The correct given name is Michele Claudio, and the family name...

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Berlot G, Vassallo MC, Busetto N, et al. Correction to: Effects of the timing of administration of IgM- and IgA-enriched intravenous polyclonal immunoglobulins on the outcome of septic shock patients. Ann Intensive Care. 2019;9(1):33doi: 10.1186/s13613-019-0504-0.
Berlot, G., Vassallo, M. C., Busetto, N., Yabar, M. N., Istrati, T., Baronio, S., Quarantotto, G., Bixio, M., Barbati, G., Dattola, R., Longo, I., Chillemi, A., Scamperle, A., Iscra, F., & Tomasini, A. (2019). Correction to: Effects of the timing of administration of IgM- and IgA-enriched intravenous polyclonal immunoglobulins on the outcome of septic shock patients. Annals of intensive care, 9(1), 33. https://doi.org/10.1186/s13613-019-0504-0
Berlot, Giorgio, et al. "Correction to: Effects of the timing of administration of IgM- and IgA-enriched intravenous polyclonal immunoglobulins on the outcome of septic shock patients." Annals of intensive care vol. 9,1 (2019): 33. doi: https://doi.org/10.1186/s13613-019-0504-0
Berlot G, Vassallo MC, Busetto N, Yabar MN, Istrati T, Baronio S, Quarantotto G, Bixio M, Barbati G, Dattola R, Longo I, Chillemi A, Scamperle A, Iscra F, Tomasini A. Correction to: Effects of the timing of administration of IgM- and IgA-enriched intravenous polyclonal immunoglobulins on the outcome of septic shock patients. Ann Intensive Care. 2019 Mar 05;9(1):33. doi: 10.1186/s13613-019-0504-0. PMID: 30838471; PMCID: PMC6401037.
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LRP1 expression in colon cancer predicts clinical outcome.

Oncotarget

Boulagnon-Rombi C, Schneider C, Leandri C, Jeanne A, Grybek V, Bressenot AM, Barbe C, Marquet B, Nasri S, Coquelet C, Fichel C, Bouland N, Bonnomet A, Kianmanesh R, Lebre AS, Bouché O, Diebold MD, Bellon G, Dedieu S.
PMID: 29507659
Oncotarget. 2018 Jan 13;9(10):8849-8869. doi: 10.18632/oncotarget.24225. eCollection 2018 Feb 06.

CONCLUSIONS: Loss of LRP1 expression is associated with worse colon cancer outcomes. Mechanistically,

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Boulagnon-Rombi C, Schneider C, Leandri C, et al. LRP1 expression in colon cancer predicts clinical outcome. Oncotarget. 2018;9(10):8849-8869doi: 10.18632/oncotarget.24225.
Boulagnon-Rombi, C., Schneider, C., Leandri, C., Jeanne, A., Grybek, V., Bressenot, A. M., Barbe, C., Marquet, B., Nasri, S., Coquelet, C., Fichel, C., Bouland, N., Bonnomet, A., Kianmanesh, R., Lebre, A. S., Bouché, O., Diebold, M. D., Bellon, G., & Dedieu, S. (2018). LRP1 expression in colon cancer predicts clinical outcome. Oncotarget, 9(10), 8849-8869. https://doi.org/10.18632/oncotarget.24225
Boulagnon-Rombi, Camille, et al. "LRP1 expression in colon cancer predicts clinical outcome." Oncotarget vol. 9,10 (2018): 8849-8869. doi: https://doi.org/10.18632/oncotarget.24225
Boulagnon-Rombi C, Schneider C, Leandri C, Jeanne A, Grybek V, Bressenot AM, Barbe C, Marquet B, Nasri S, Coquelet C, Fichel C, Bouland N, Bonnomet A, Kianmanesh R, Lebre AS, Bouché O, Diebold MD, Bellon G, Dedieu S. LRP1 expression in colon cancer predicts clinical outcome. Oncotarget. 2018 Jan 13;9(10):8849-8869. doi: 10.18632/oncotarget.24225. eCollection 2018 Feb 06. PMID: 29507659; PMCID: PMC5823651.
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Human Cancer-Associated Mutations of SF3B1 Lead to a Splicing Modification of Its Own RNA.

Cancers

Bergot T, Lippert E, Douet-Guilbert N, Commet S, Corcos L, Bernard DG.
PMID: 32168916
Cancers (Basel). 2020 Mar 11;12(3). doi: 10.3390/cancers12030652.

Deregulation of pre-mRNA splicing is observed in many cancers and hematological malignancies. Genes encoding splicing factors are frequently mutated in myelodysplastic syndromes, in which

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Bergot T, Lippert E, Douet-Guilbert N, et al. Human Cancer-Associated Mutations of SF3B1 Lead to a Splicing Modification of Its Own RNA. Cancers (Basel). 2020;12(3)doi: 10.3390/cancers12030652.
Bergot, T., Lippert, E., Douet-Guilbert, N., Commet, S., Corcos, L., & Bernard, D. G. (2020). Human Cancer-Associated Mutations of SF3B1 Lead to a Splicing Modification of Its Own RNA. Cancers, 12(3), . https://doi.org/10.3390/cancers12030652
Bergot, Tiffany, et al. "Human Cancer-Associated Mutations of SF3B1 Lead to a Splicing Modification of Its Own RNA." Cancers vol. 12,3 (2020). doi: https://doi.org/10.3390/cancers12030652
Bergot T, Lippert E, Douet-Guilbert N, Commet S, Corcos L, Bernard DG. Human Cancer-Associated Mutations of SF3B1 Lead to a Splicing Modification of Its Own RNA. Cancers (Basel). 2020 Mar 11;12(3). doi: 10.3390/cancers12030652. PMID: 32168916; PMCID: PMC7139785.
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Lung Microbiome in Asthma: Current Perspectives.

Journal of clinical medicine

Loverdos K, Bellos G, Kokolatou L, Vasileiadis I, Giamarellos E, Pecchiari M, Koulouris N, Koutsoukou A, Rovina N.
PMID: 31739446
J Clin Med. 2019 Nov 14;8(11). doi: 10.3390/jcm8111967.

A growing body of evidence implicates the human microbiome as a potentially influential player actively engaged in shaping the pathogenetic processes underlying the endotypes and phenotypes of chronic respiratory diseases, particularly of the airways. In this article, we specifically...

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Loverdos K, Bellos G, Kokolatou L, et al. Lung Microbiome in Asthma: Current Perspectives. J Clin Med. 2019;8(11)doi: 10.3390/jcm8111967.
Loverdos, K., Bellos, G., Kokolatou, L., Vasileiadis, I., Giamarellos, E., Pecchiari, M., Koulouris, N., Koutsoukou, A., & Rovina, N. (2019). Lung Microbiome in Asthma: Current Perspectives. Journal of clinical medicine, 8(11), . https://doi.org/10.3390/jcm8111967
Loverdos, Konstantinos, et al. "Lung Microbiome in Asthma: Current Perspectives." Journal of clinical medicine vol. 8,11 (2019). doi: https://doi.org/10.3390/jcm8111967
Loverdos K, Bellos G, Kokolatou L, Vasileiadis I, Giamarellos E, Pecchiari M, Koulouris N, Koutsoukou A, Rovina N. Lung Microbiome in Asthma: Current Perspectives. J Clin Med. 2019 Nov 14;8(11). doi: 10.3390/jcm8111967. PMID: 31739446; PMCID: PMC6912699.
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