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Comparative analysis of transcriptomes in aerial stems and roots of Ephedra sinica based on high-throughput mRNA sequencing.

Genomics data

Okada T, Takahashi H, Suzuki Y, Sugano S, Noji M, Kenmoku H, Toyota M, Kanaya S, Kawahara N, Asakawa Y, Sekita S.
PMID: 27625990
Genom Data. 2016 Aug 04;10:4-11. doi: 10.1016/j.gdata.2016.08.003. eCollection 2016 Dec.

Ephedra plants are taxonomically classified as gymnosperms, and are medicinally important as the botanical origin of crude drugs and as bioresources that contain pharmacologically active chemicals. Here we show a comparative analysis of the transcriptomes of aerial stems and...

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Okada T, Takahashi H, Suzuki Y, et al. Comparative analysis of transcriptomes in aerial stems and roots of Ephedra sinica based on high-throughput mRNA sequencing. Genom Data. 2016;10:4-11doi: 10.1016/j.gdata.2016.08.003.
Okada, T., Takahashi, H., Suzuki, Y., Sugano, S., Noji, M., Kenmoku, H., Toyota, M., Kanaya, S., Kawahara, N., Asakawa, Y., & Sekita, S. (2016). Comparative analysis of transcriptomes in aerial stems and roots of Ephedra sinica based on high-throughput mRNA sequencing. Genomics data, 104-11. https://doi.org/10.1016/j.gdata.2016.08.003
Okada, Taketo, et al. "Comparative analysis of transcriptomes in aerial stems and roots of Ephedra sinica based on high-throughput mRNA sequencing." Genomics data vol. 10 (2016): 4-11. doi: https://doi.org/10.1016/j.gdata.2016.08.003
Okada T, Takahashi H, Suzuki Y, Sugano S, Noji M, Kenmoku H, Toyota M, Kanaya S, Kawahara N, Asakawa Y, Sekita S. Comparative analysis of transcriptomes in aerial stems and roots of Ephedra sinica based on high-throughput mRNA sequencing. Genom Data. 2016 Aug 04;10:4-11. doi: 10.1016/j.gdata.2016.08.003. eCollection 2016 Dec. PMID: 27625990; PMCID: PMC5011178.
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Ultrafast time-resolved electron diffraction revealing the nonthermal dynamics of near-UV photoexcitation-induced amorphization in Ge2Sb2Te5.

Scientific reports

Hada M, Oba W, Kuwahara M, Katayama I, Saiki T, Takeda J, Nakamura KG.
PMID: 26314613
Sci Rep. 2015 Aug 28;5:13530. doi: 10.1038/srep13530.

Because of their robust switching capability, chalcogenide glass materials have been used for a wide range of applications, including optical storages devices. These phase transitions are achieved by laser irradiation via thermal processes. Recent studies have suggested the potential...

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Hada M, Oba W, Kuwahara M, et al. Ultrafast time-resolved electron diffraction revealing the nonthermal dynamics of near-UV photoexcitation-induced amorphization in Ge2Sb2Te5. Sci Rep. 2015;5:13530doi: 10.1038/srep13530.
Hada, M., Oba, W., Kuwahara, M., Katayama, I., Saiki, T., Takeda, J., & Nakamura, K. G. (2015). Ultrafast time-resolved electron diffraction revealing the nonthermal dynamics of near-UV photoexcitation-induced amorphization in Ge2Sb2Te5. Scientific reports, 513530. https://doi.org/10.1038/srep13530
Hada, Masaki, et al. "Ultrafast time-resolved electron diffraction revealing the nonthermal dynamics of near-UV photoexcitation-induced amorphization in Ge2Sb2Te5." Scientific reports vol. 5 (2015): 13530. doi: https://doi.org/10.1038/srep13530
Hada M, Oba W, Kuwahara M, Katayama I, Saiki T, Takeda J, Nakamura KG. Ultrafast time-resolved electron diffraction revealing the nonthermal dynamics of near-UV photoexcitation-induced amorphization in Ge2Sb2Te5. Sci Rep. 2015 Aug 28;5:13530. doi: 10.1038/srep13530. PMID: 26314613; PMCID: PMC4551965.
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Programmed cell death-ligand 1 expression and immunoscore in stage II and III non-small cell lung cancer patients receiving adjuvant chemotherapy.

Oncotarget

Ishii H, Azuma K, Kawahara A, Matsuo N, Tokito T, Kinoshita T, Yamada K, Sasada T, Akiba J, Hoshino T.
PMID: 28977890
Oncotarget. 2017 Jun 27;8(37):61618-61625. doi: 10.18632/oncotarget.18651. eCollection 2017 Sep 22.

Programmed cell death 1 (PD-1) receptor-ligand interaction is a major pathway that is often hijacked by tumors to suppress immune control. Immunoscore (IS), a combinational index of CD3 and CD8 tumor-infiltrating lymphocyte (TIL) density in the tumor's center and...

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Ishii H, Azuma K, Kawahara A, et al. Programmed cell death-ligand 1 expression and immunoscore in stage II and III non-small cell lung cancer patients receiving adjuvant chemotherapy. Oncotarget. 2017;8(37):61618-61625doi: 10.18632/oncotarget.18651.
Ishii, H., Azuma, K., Kawahara, A., Matsuo, N., Tokito, T., Kinoshita, T., Yamada, K., Sasada, T., Akiba, J., & Hoshino, T. (2017). Programmed cell death-ligand 1 expression and immunoscore in stage II and III non-small cell lung cancer patients receiving adjuvant chemotherapy. Oncotarget, 8(37), 61618-61625. https://doi.org/10.18632/oncotarget.18651
Ishii, Hidenobu, et al. "Programmed cell death-ligand 1 expression and immunoscore in stage II and III non-small cell lung cancer patients receiving adjuvant chemotherapy." Oncotarget vol. 8,37 (2017): 61618-61625. doi: https://doi.org/10.18632/oncotarget.18651
Ishii H, Azuma K, Kawahara A, Matsuo N, Tokito T, Kinoshita T, Yamada K, Sasada T, Akiba J, Hoshino T. Programmed cell death-ligand 1 expression and immunoscore in stage II and III non-small cell lung cancer patients receiving adjuvant chemotherapy. Oncotarget. 2017 Jun 27;8(37):61618-61625. doi: 10.18632/oncotarget.18651. eCollection 2017 Sep 22. PMID: 28977890; PMCID: PMC5617450.
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The psychoactive drug 25B-NBOMe recapitulates rhabdomyolysis in zebrafish larvae.

Forensic toxicology

Kawahara G, Maeda H, Kikura-Hanajiri R, Yoshida KI, Hayashi YK.
PMID: 28890736
Forensic Toxicol. 2017;35(2):369-375. doi: 10.1007/s11419-017-0366-9. Epub 2017 Apr 18.

No abstract available.

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Kawahara G, Maeda H, Kikura-Hanajiri R, et al. The psychoactive drug 25B-NBOMe recapitulates rhabdomyolysis in zebrafish larvae. Forensic Toxicol. 2017;35(2):369-375doi: 10.1007/s11419-017-0366-9.
Kawahara, G., Maeda, H., Kikura-Hanajiri, R., Yoshida, K. I., & Hayashi, Y. K. (2017). The psychoactive drug 25B-NBOMe recapitulates rhabdomyolysis in zebrafish larvae. Forensic toxicology, 35(2), 369-375. https://doi.org/10.1007/s11419-017-0366-9
Kawahara, Genri, et al. "The psychoactive drug 25B-NBOMe recapitulates rhabdomyolysis in zebrafish larvae." Forensic toxicology vol. 35,2 (2017): 369-375. doi: https://doi.org/10.1007/s11419-017-0366-9
Kawahara G, Maeda H, Kikura-Hanajiri R, Yoshida KI, Hayashi YK. The psychoactive drug 25B-NBOMe recapitulates rhabdomyolysis in zebrafish larvae. Forensic Toxicol. 2017;35(2):369-375. doi: 10.1007/s11419-017-0366-9. Epub 2017 Apr 18. PMID: 28890736; PMCID: PMC5552826.
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Data on the effect of .

Data in brief

Miyamoto Y, Torii T, Kawahara K, Inoue M, Morimoto T, Yamamoto M, Yamauchi J.
PMID: 28480322
Data Brief. 2017 Apr 15;12:313-319. doi: 10.1016/j.dib.2017.04.014. eCollection 2017 Jun.

Mature Schwann cells, the peripheral nervous system (PNS) glial cells, have two major roles for neuronal axons (Bunge, 1993) [1]. For large diameter axons, Schwann cells form myelin sheaths with multiple layers. For small diameter axons, they form Remak...

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Miyamoto Y, Torii T, Kawahara K, et al. Data on the effect of . Data Brief. 2017;12:313-319doi: 10.1016/j.dib.2017.04.014.
Miyamoto, Y., Torii, T., Kawahara, K., Inoue, M., Morimoto, T., Yamamoto, M., & Yamauchi, J. (2017). Data on the effect of . Data in brief, 12313-319. https://doi.org/10.1016/j.dib.2017.04.014
Miyamoto, Yuki, et al. "Data on the effect of ." Data in brief vol. 12 (2017): 313-319. doi: https://doi.org/10.1016/j.dib.2017.04.014
Miyamoto Y, Torii T, Kawahara K, Inoue M, Morimoto T, Yamamoto M, Yamauchi J. Data on the effect of . Data Brief. 2017 Apr 15;12:313-319. doi: 10.1016/j.dib.2017.04.014. eCollection 2017 Jun. PMID: 28480322; PMCID: PMC5407571.
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Dystrophic muscle improvement in zebrafish via increased heme oxygenase signaling.

Human molecular genetics

Kawahara G, Gasperini MJ, Myers JA, Widrick JJ, Eran A, Serafini PR, Alexander MS, Pletcher MT, Morris CA, Kunkel LM.
PMID: 26034133
Hum Mol Genet. 2015 Aug 01;24(15):4480-1. doi: 10.1093/hmg/ddv169. Epub 2015 Jun 01.

No abstract available.

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Kawahara G, Gasperini MJ, Myers JA, et al. Dystrophic muscle improvement in zebrafish via increased heme oxygenase signaling. Hum Mol Genet. 2015;24(15):4480-1doi: 10.1093/hmg/ddv169.
Kawahara, G., Gasperini, M. J., Myers, J. A., Widrick, J. J., Eran, A., Serafini, P. R., Alexander, M. S., Pletcher, M. T., Morris, C. A., & Kunkel, L. M. (2015). Dystrophic muscle improvement in zebrafish via increased heme oxygenase signaling. Human molecular genetics, 24(15), 4480-1. https://doi.org/10.1093/hmg/ddv169
Kawahara, Genri, et al. "Dystrophic muscle improvement in zebrafish via increased heme oxygenase signaling." Human molecular genetics vol. 24,15 (2015): 4480-1. doi: https://doi.org/10.1093/hmg/ddv169
Kawahara G, Gasperini MJ, Myers JA, Widrick JJ, Eran A, Serafini PR, Alexander MS, Pletcher MT, Morris CA, Kunkel LM. Dystrophic muscle improvement in zebrafish via increased heme oxygenase signaling. Hum Mol Genet. 2015 Aug 01;24(15):4480-1. doi: 10.1093/hmg/ddv169. Epub 2015 Jun 01. PMID: 26034133; PMCID: PMC5266494.
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Effects of Okadaic Acid on Embryonic Development of the Starfish Asterina pectinifera.

Bioscience, biotechnology, and biochemistry

Ikegami S, Kajiyama N, Ozaki Y, Ooe Y, Shimizu T, Kasahara T, Uemura D, Shioda M.
PMID: 27286370
Biosci Biotechnol Biochem. 1992 Jan;56(7):1007-11. doi: 10.1271/bbb.56.1007.

The effects of okadaic acid, an inhibitor of protein phosphatases types 1 and 2A, from the sponge Halichondria okadai Kadota, on the embryonic development of the starfish Asterina pectinifera, were investigated. When cultured in okadaic acid from fertilization, the...

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Ikegami S, Kajiyama N, Ozaki Y, et al. Effects of Okadaic Acid on Embryonic Development of the Starfish Asterina pectinifera. Biosci Biotechnol Biochem. 1992;56(7):1007-11doi: 10.1271/bbb.56.1007.
Ikegami, S., Kajiyama, N., Ozaki, Y., Ooe, Y., Shimizu, T., Kasahara, T., Uemura, D., & Shioda, M. (1992). Effects of Okadaic Acid on Embryonic Development of the Starfish Asterina pectinifera. Bioscience, biotechnology, and biochemistry, 56(7), 1007-11. https://doi.org/10.1271/bbb.56.1007
Ikegami, S, et al. "Effects of Okadaic Acid on Embryonic Development of the Starfish Asterina pectinifera." Bioscience, biotechnology, and biochemistry vol. 56,7 (1992): 1007-11. doi: https://doi.org/10.1271/bbb.56.1007
Ikegami S, Kajiyama N, Ozaki Y, Ooe Y, Shimizu T, Kasahara T, Uemura D, Shioda M. Effects of Okadaic Acid on Embryonic Development of the Starfish Asterina pectinifera. Biosci Biotechnol Biochem. 1992 Jan;56(7):1007-11. doi: 10.1271/bbb.56.1007. PMID: 27286370.
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A functional mesoporous ionic crystal based on polyoxometalate.

Dalton transactions (Cambridge, England : 2003)

Kawahara R, Niinomi K, Kondo JN, Hibino M, Mizuno N, Uchida S.
PMID: 26804446
Dalton Trans. 2016 Feb 21;45(7):2805-9. doi: 10.1039/c5dt04556h. Epub 2016 Jan 25.

A mesoporous ionic crystal is synthesized with a polyoxometalate and a macrocation with polar cyano groups. The compound possesses one-dimensional mesopores with an opening of 3.0 × 2.0 nm. The compound shows high proton conductivity and catalytic activity, which...

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Kawahara R, Niinomi K, Kondo JN, et al. A functional mesoporous ionic crystal based on polyoxometalate. Dalton Trans. 2016;45(7):2805-9doi: 10.1039/c5dt04556h.
Kawahara, R., Niinomi, K., Kondo, J. N., Hibino, M., Mizuno, N., & Uchida, S. (2016). A functional mesoporous ionic crystal based on polyoxometalate. Dalton transactions (Cambridge, England : 2003), 45(7), 2805-9. https://doi.org/10.1039/c5dt04556h
Kawahara, Ryosuke, et al. "A functional mesoporous ionic crystal based on polyoxometalate." Dalton transactions (Cambridge, England : 2003) vol. 45,7 (2016): 2805-9. doi: https://doi.org/10.1039/c5dt04556h
Kawahara R, Niinomi K, Kondo JN, Hibino M, Mizuno N, Uchida S. A functional mesoporous ionic crystal based on polyoxometalate. Dalton Trans. 2016 Feb 21;45(7):2805-9. doi: 10.1039/c5dt04556h. Epub 2016 Jan 25. PMID: 26804446.
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The cause for the low efficiency of dye sensitized solar cells with a combination of ruthenium dyes and cobalt redox.

Physical chemistry chemical physics : PCCP

Omata K, Kuwahara S, Katayama K, Qing S, Toyoda T, Lee KM, Wu CG.
PMID: 25793225
Phys Chem Chem Phys. 2015 Apr 21;17(15):10170-5. doi: 10.1039/c4cp05981f.

It has been a concern that the cobalt redox cannot give a good performance for the dye-sensitized solar cells when it is used with ruthenium dyes. The electron dynamics measurements clarified the electron loss processes, and clarified the cause....

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Omata K, Kuwahara S, Katayama K, et al. The cause for the low efficiency of dye sensitized solar cells with a combination of ruthenium dyes and cobalt redox. Phys Chem Chem Phys. 2015;17(15):10170-5doi: 10.1039/c4cp05981f.
Omata, K., Kuwahara, S., Katayama, K., Qing, S., Toyoda, T., Lee, K. M., & Wu, C. G. (2015). The cause for the low efficiency of dye sensitized solar cells with a combination of ruthenium dyes and cobalt redox. Physical chemistry chemical physics : PCCP, 17(15), 10170-5. https://doi.org/10.1039/c4cp05981f
Omata, Keita, et al. "The cause for the low efficiency of dye sensitized solar cells with a combination of ruthenium dyes and cobalt redox." Physical chemistry chemical physics : PCCP vol. 17,15 (2015): 10170-5. doi: https://doi.org/10.1039/c4cp05981f
Omata K, Kuwahara S, Katayama K, Qing S, Toyoda T, Lee KM, Wu CG. The cause for the low efficiency of dye sensitized solar cells with a combination of ruthenium dyes and cobalt redox. Phys Chem Chem Phys. 2015 Apr 21;17(15):10170-5. doi: 10.1039/c4cp05981f. PMID: 25793225.
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Determination of formaldehyde in aqueous samples with a miniaturized extraction capillary coupled to high-performance liquid chromatography.

Analytical sciences : the international journal of the Japan Society for Analytical Chemistry

Ueta I, Mochizuki S, Kawakubo S, Kuwabara T, Saito Y.
PMID: 25746807
Anal Sci. 2015;31(2):99-103. doi: 10.2116/analsci.31.99.

A novel analytical method for determining formaldehyde (FA) in aqueous samples was developed with a miniaturized extraction capillary in high-performance liquid chromatography (HPLC). The extraction capillary was prepared by packing silica gel particles in a stainless steel capillary of...

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Ueta I, Mochizuki S, Kawakubo S, et al. Determination of formaldehyde in aqueous samples with a miniaturized extraction capillary coupled to high-performance liquid chromatography. Anal Sci. 2015;31(2):99-103doi: 10.2116/analsci.31.99.
Ueta, I., Mochizuki, S., Kawakubo, S., Kuwabara, T., & Saito, Y. (2015). Determination of formaldehyde in aqueous samples with a miniaturized extraction capillary coupled to high-performance liquid chromatography. Analytical sciences : the international journal of the Japan Society for Analytical Chemistry, 31(2), 99-103. https://doi.org/10.2116/analsci.31.99
Ueta, Ikuo, et al. "Determination of formaldehyde in aqueous samples with a miniaturized extraction capillary coupled to high-performance liquid chromatography." Analytical sciences : the international journal of the Japan Society for Analytical Chemistry vol. 31,2 (2015): 99-103. doi: https://doi.org/10.2116/analsci.31.99
Ueta I, Mochizuki S, Kawakubo S, Kuwabara T, Saito Y. Determination of formaldehyde in aqueous samples with a miniaturized extraction capillary coupled to high-performance liquid chromatography. Anal Sci. 2015;31(2):99-103. doi: 10.2116/analsci.31.99. PMID: 25746807.
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Induction of Strong and Tunable Circularly Polarized Luminescence of Nonchiral, Nonmetal, Low-Molecular-Weight Fluorophores Using Chiral Nanotemplates.

Angewandte Chemie (International ed. in English)

Goto T, Okazaki Y, Ueki M, Kuwahara Y, Takafuji M, Oda R, Ihara H.
PMID: 28146313
Angew Chem Int Ed Engl. 2017 Mar 06;56(11):2989-2993. doi: 10.1002/anie.201612331. Epub 2017 Jan 31.

A new strategy is described for generating strong circularly polarized luminescence with highly tunable emission bands through chiral induction in nonchiral, totally organic, low-molecular-weight fluorescent dyes by chiral nanotemplate systems. Our approach allows the first systematic investigation to clarify...

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Goto T, Okazaki Y, Ueki M, et al. Induction of Strong and Tunable Circularly Polarized Luminescence of Nonchiral, Nonmetal, Low-Molecular-Weight Fluorophores Using Chiral Nanotemplates. Angew Chem Int Ed Engl. 2017;56(11):2989-2993doi: 10.1002/anie.201612331.
Goto, T., Okazaki, Y., Ueki, M., Kuwahara, Y., Takafuji, M., Oda, R., & Ihara, H. (2017). Induction of Strong and Tunable Circularly Polarized Luminescence of Nonchiral, Nonmetal, Low-Molecular-Weight Fluorophores Using Chiral Nanotemplates. Angewandte Chemie (International ed. in English), 56(11), 2989-2993. https://doi.org/10.1002/anie.201612331
Goto, Taisei, et al. "Induction of Strong and Tunable Circularly Polarized Luminescence of Nonchiral, Nonmetal, Low-Molecular-Weight Fluorophores Using Chiral Nanotemplates." Angewandte Chemie (International ed. in English) vol. 56,11 (2017): 2989-2993. doi: https://doi.org/10.1002/anie.201612331
Goto T, Okazaki Y, Ueki M, Kuwahara Y, Takafuji M, Oda R, Ihara H. Induction of Strong and Tunable Circularly Polarized Luminescence of Nonchiral, Nonmetal, Low-Molecular-Weight Fluorophores Using Chiral Nanotemplates. Angew Chem Int Ed Engl. 2017 Mar 06;56(11):2989-2993. doi: 10.1002/anie.201612331. Epub 2017 Jan 31. PMID: 28146313.
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Synthesis and Photostability of Unimolecular Submersible Nanomachines: Toward Single-Molecule Tracking in Solution.

Organic letters

García-López V, Jeffet J, Kuwahara S, Martí AA, Ebenstein Y, Tour JM.
PMID: 27124281
Org Lett. 2016 May 20;18(10):2343-6. doi: 10.1021/acs.orglett.6b00506. Epub 2016 Apr 28.

The synthesis and photophysical properties of a series of photostable unimolecular submersible nanomachines (USNs) are reported as a first step toward the analysis of their trajectories in solution. The USNs have a light-driven rotatory motor for propulsion in solution...

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García-López V, Jeffet J, Kuwahara S, et al. Synthesis and Photostability of Unimolecular Submersible Nanomachines: Toward Single-Molecule Tracking in Solution. Org Lett. 2016;18(10):2343-6doi: 10.1021/acs.orglett.6b00506.
García-López, V., Jeffet, J., Kuwahara, S., Martí, A. A., Ebenstein, Y., & Tour, J. M. (2016). Synthesis and Photostability of Unimolecular Submersible Nanomachines: Toward Single-Molecule Tracking in Solution. Organic letters, 18(10), 2343-6. https://doi.org/10.1021/acs.orglett.6b00506
García-López, Víctor, et al. "Synthesis and Photostability of Unimolecular Submersible Nanomachines: Toward Single-Molecule Tracking in Solution." Organic letters vol. 18,10 (2016): 2343-6. doi: https://doi.org/10.1021/acs.orglett.6b00506
García-López V, Jeffet J, Kuwahara S, Martí AA, Ebenstein Y, Tour JM. Synthesis and Photostability of Unimolecular Submersible Nanomachines: Toward Single-Molecule Tracking in Solution. Org Lett. 2016 May 20;18(10):2343-6. doi: 10.1021/acs.orglett.6b00506. Epub 2016 Apr 28. PMID: 27124281; PMCID: PMC4877667.
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Showing 1 to 12 of 1701 entries