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Empirical Growth Curve Estimation Using Sigmoid Sub-functions that Adjust Seasonal Compensatory Growth for Male Body Weight of Thoroughbred Horses.

Journal of equine science

Onoda T, Yamamoto R, Sawamura K, Inoue Y, Matsui A, Miyake T, Hirai N.
PMID: 24833986
J Equine Sci. 2011;22(2):37-42. doi: 10.1294/jes.22.37. Epub 2011 Jul 20.

Thoroughbred horses are seasonal mating animals, raised in northern regions or countries. Foals born yearly in spring generally show a typical seasonal compensatory growth pattern, in which their growth rate declines in the first winter and increases in the...

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Onoda T, Yamamoto R, Sawamura K, et al. Empirical Growth Curve Estimation Using Sigmoid Sub-functions that Adjust Seasonal Compensatory Growth for Male Body Weight of Thoroughbred Horses. J Equine Sci. 2011;22(2):37-42doi: 10.1294/jes.22.37.
Onoda, T., Yamamoto, R., Sawamura, K., Inoue, Y., Matsui, A., Miyake, T., & Hirai, N. (2011). Empirical Growth Curve Estimation Using Sigmoid Sub-functions that Adjust Seasonal Compensatory Growth for Male Body Weight of Thoroughbred Horses. Journal of equine science, 22(2), 37-42. https://doi.org/10.1294/jes.22.37
Onoda, Tomoaki, et al. "Empirical Growth Curve Estimation Using Sigmoid Sub-functions that Adjust Seasonal Compensatory Growth for Male Body Weight of Thoroughbred Horses." Journal of equine science vol. 22,2 (2011): 37-42. doi: https://doi.org/10.1294/jes.22.37
Onoda T, Yamamoto R, Sawamura K, Inoue Y, Matsui A, Miyake T, Hirai N. Empirical Growth Curve Estimation Using Sigmoid Sub-functions that Adjust Seasonal Compensatory Growth for Male Body Weight of Thoroughbred Horses. J Equine Sci. 2011;22(2):37-42. doi: 10.1294/jes.22.37. Epub 2011 Jul 20. PMID: 24833986; PMCID: PMC4013972.
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Accurate prediction of X-ray pulse properties from a free-electron laser using machine learning.

Nature communications

Sanchez-Gonzalez A, Micaelli P, Olivier C, Barillot TR, Ilchen M, Lutman AA, Marinelli A, Maxwell T, Achner A, Agåker M, Berrah N, Bostedt C, Bozek JD, Buck J, Bucksbaum PH, Montero SC, Cooper B, Cryan JP, Dong M, Feifel R, Frasinski LJ, Fukuzawa H, Galler A, Hartmann G, Hartmann N, Helml W, Johnson AS, Knie A, Lindahl AO, Liu J, Motomura K, Mucke M, O'Grady C, Rubensson JE, Simpson ER, Squibb RJ, Såthe C, Ueda K, Vacher M, Walke DJ, Zhaunerchyk V, Coffee RN, Marangos JP.
PMID: 28580940
Nat Commun. 2017 Jun 05;8:15461. doi: 10.1038/ncomms15461.

Free-electron lasers providing ultra-short high-brightness pulses of X-ray radiation have great potential for a wide impact on science, and are a critical element for unravelling the structural dynamics of matter. To fully harness this potential, we must accurately know...

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Sanchez-Gonzalez A, Micaelli P, Olivier C, et al. Accurate prediction of X-ray pulse properties from a free-electron laser using machine learning. Nat Commun. 2017;8:15461doi: 10.1038/ncomms15461.
Sanchez-Gonzalez, A., Micaelli, P., Olivier, C., Barillot, T. R., Ilchen, M., Lutman, A. A., Marinelli, A., Maxwell, T., Achner, A., Agåker, M., Berrah, N., Bostedt, C., Bozek, J. D., Buck, J., Bucksbaum, P. H., Montero, S. C., Cooper, B., Cryan, J. P., Dong, M., Feifel, R., Frasinski, L. J., Fukuzawa, H., Galler, A., Hartmann, G., Hartmann, N., Helml, W., Johnson, A. S., Knie, A., Lindahl, A. O., Liu, J., Motomura, K., Mucke, M., O'Grady, C., Rubensson, J. E., Simpson, E. R., Squibb, R. J., Såthe, C., Ueda, K., Vacher, M., Walke, D. J., Zhaunerchyk, V., Coffee, R. N., & Marangos, J. P. (2017). Accurate prediction of X-ray pulse properties from a free-electron laser using machine learning. Nature communications, 815461. https://doi.org/10.1038/ncomms15461
Sanchez-Gonzalez, A, et al. "Accurate prediction of X-ray pulse properties from a free-electron laser using machine learning." Nature communications vol. 8 (2017): 15461. doi: https://doi.org/10.1038/ncomms15461
Sanchez-Gonzalez A, Micaelli P, Olivier C, Barillot TR, Ilchen M, Lutman AA, Marinelli A, Maxwell T, Achner A, Agåker M, Berrah N, Bostedt C, Bozek JD, Buck J, Bucksbaum PH, Montero SC, Cooper B, Cryan JP, Dong M, Feifel R, Frasinski LJ, Fukuzawa H, Galler A, Hartmann G, Hartmann N, Helml W, Johnson AS, Knie A, Lindahl AO, Liu J, Motomura K, Mucke M, O'Grady C, Rubensson JE, Simpson ER, Squibb RJ, Såthe C, Ueda K, Vacher M, Walke DJ, Zhaunerchyk V, Coffee RN, Marangos JP. Accurate prediction of X-ray pulse properties from a free-electron laser using machine learning. Nat Commun. 2017 Jun 05;8:15461. doi: 10.1038/ncomms15461. PMID: 28580940; PMCID: PMC5465316.
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Femtosecond charge and molecular dynamics of I-containing organic molecules induced by intense X-ray free-electron laser pulses.

Faraday discussions

Nagaya K, Motomura K, Kukk E, Takahashi Y, Yamazaki K, Ohmura S, Fukuzawa H, Wada S, Mondal S, Tachibana T, Ito Y, Koga R, Sakai T, Matsunami K, Nakamura K, Kanno M, Rudenko A, Nicolas C, Liu XJ, Miron C, Zhang Y, Jiang Y, Chen J, Anand M, Kim DE, Tono K, Yabashi M, Yao M, Kono H, Ueda K.
PMID: 27797386
Faraday Discuss. 2016 Dec 16;194:537-562. doi: 10.1039/c6fd00085a.

We studied the electronic and nuclear dynamics of I-containing organic molecules induced by intense hard X-ray pulses at the XFEL facility SACLA in Japan. The interaction with the intense XFEL pulse causes absorption of multiple X-ray photons by the...

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Nagaya K, Motomura K, Kukk E, et al. Femtosecond charge and molecular dynamics of I-containing organic molecules induced by intense X-ray free-electron laser pulses. Faraday Discuss. 2016;194:537-562doi: 10.1039/c6fd00085a.
Nagaya, K., Motomura, K., Kukk, E., Takahashi, Y., Yamazaki, K., Ohmura, S., Fukuzawa, H., Wada, S., Mondal, S., Tachibana, T., Ito, Y., Koga, R., Sakai, T., Matsunami, K., Nakamura, K., Kanno, M., Rudenko, A., Nicolas, C., Liu, X. J., Miron, C., Zhang, Y., Jiang, Y., Chen, J., Anand, M., Kim, D. E., Tono, K., Yabashi, M., Yao, M., Kono, H., & Ueda, K. (2016). Femtosecond charge and molecular dynamics of I-containing organic molecules induced by intense X-ray free-electron laser pulses. Faraday discussions, 194537-562. https://doi.org/10.1039/c6fd00085a
Nagaya, K, et al. "Femtosecond charge and molecular dynamics of I-containing organic molecules induced by intense X-ray free-electron laser pulses." Faraday discussions vol. 194 (2016): 537-562. doi: https://doi.org/10.1039/c6fd00085a
Nagaya K, Motomura K, Kukk E, Takahashi Y, Yamazaki K, Ohmura S, Fukuzawa H, Wada S, Mondal S, Tachibana T, Ito Y, Koga R, Sakai T, Matsunami K, Nakamura K, Kanno M, Rudenko A, Nicolas C, Liu XJ, Miron C, Zhang Y, Jiang Y, Chen J, Anand M, Kim DE, Tono K, Yabashi M, Yao M, Kono H, Ueda K. Femtosecond charge and molecular dynamics of I-containing organic molecules induced by intense X-ray free-electron laser pulses. Faraday Discuss. 2016 Dec 16;194:537-562. doi: 10.1039/c6fd00085a. PMID: 27797386.
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Erratum: Precise genome-wide base editing by the CRISPR Nickase system in yeast.

Scientific reports

Satomura A, Nishioka R, Mori H, Sato K, Kuroda K, Ueda M.
PMID: 28955053
Sci Rep. 2017 Sep 27;7(1):12354. doi: 10.1038/s41598-017-09606-2.

A correction to this Article has been published and is linked from the HTML version of this paper. The error has been fixed in the paper.

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Satomura A, Nishioka R, Mori H, et al. Erratum: Precise genome-wide base editing by the CRISPR Nickase system in yeast. Sci Rep. 2017;7(1):12354doi: 10.1038/s41598-017-09606-2.
Satomura, A., Nishioka, R., Mori, H., Sato, K., Kuroda, K., & Ueda, M. (2017). Erratum: Precise genome-wide base editing by the CRISPR Nickase system in yeast. Scientific reports, 7(1), 12354. https://doi.org/10.1038/s41598-017-09606-2
Satomura, Atsushi, et al. "Erratum: Precise genome-wide base editing by the CRISPR Nickase system in yeast." Scientific reports vol. 7,1 (2017): 12354. doi: https://doi.org/10.1038/s41598-017-09606-2
Satomura A, Nishioka R, Mori H, Sato K, Kuroda K, Ueda M. Erratum: Precise genome-wide base editing by the CRISPR Nickase system in yeast. Sci Rep. 2017 Sep 27;7(1):12354. doi: 10.1038/s41598-017-09606-2. PMID: 28955053; PMCID: PMC5617842.
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NG2 proteoglycan-dependent recruitment of tumor macrophages promotes pericyte-endothelial cell interactions required for brain tumor vascularization.

Oncoimmunology

Yotsumoto F, You WK, Cejudo-Martin P, Kucharova K, Sakimura K, Stallcup WB.
PMID: 26137396
Oncoimmunology. 2015 Jan 22;4(4):e1001204. doi: 10.1080/2162402X.2014.1001204. eCollection 2015 Apr.

Early stage growth of intracranial B16F10 tumors is reduced by 87% in myeloid-specific NG2 null (Mac-NG2ko) mice and by 77% in pericyte-specific NG2 null (PC-NG2ko) mice, demonstrating the importance of the NG2 proteoglycan in each of these stromal compartments....

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Yotsumoto F, You WK, Cejudo-Martin P, et al. NG2 proteoglycan-dependent recruitment of tumor macrophages promotes pericyte-endothelial cell interactions required for brain tumor vascularization. Oncoimmunology. 2015;4(4):e1001204doi: 10.1080/2162402X.2014.1001204.
Yotsumoto, F., You, W. K., Cejudo-Martin, P., Kucharova, K., Sakimura, K., & Stallcup, W. B. (2015). NG2 proteoglycan-dependent recruitment of tumor macrophages promotes pericyte-endothelial cell interactions required for brain tumor vascularization. Oncoimmunology, 4(4), e1001204. https://doi.org/10.1080/2162402X.2014.1001204
Yotsumoto, Fusanori, et al. "NG2 proteoglycan-dependent recruitment of tumor macrophages promotes pericyte-endothelial cell interactions required for brain tumor vascularization." Oncoimmunology vol. 4,4 (2015): e1001204. doi: https://doi.org/10.1080/2162402X.2014.1001204
Yotsumoto F, You WK, Cejudo-Martin P, Kucharova K, Sakimura K, Stallcup WB. NG2 proteoglycan-dependent recruitment of tumor macrophages promotes pericyte-endothelial cell interactions required for brain tumor vascularization. Oncoimmunology. 2015 Jan 22;4(4):e1001204. doi: 10.1080/2162402X.2014.1001204. eCollection 2015 Apr. PMID: 26137396; PMCID: PMC4485789.
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An approach of estimating individual growth curves for young thoroughbred horses based on their birthdays.

Journal of equine science

Onoda T, Yamamoto R, Sawamura K, Murase H, Nambo Y, Inoue Y, Matsui A, Miyake T, Hirai N.
PMID: 25013356
J Equine Sci. 2014;25(2):29-35. doi: 10.1294/jes.25.29. Epub 2014 Jun 25.

We propose an approach of estimating individual growth curves based on the birthday information of Japanese Thoroughbred horses, with considerations of the seasonal compensatory growth that is a typical characteristic of seasonal breeding animals. The compensatory growth patterns appear...

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Onoda T, Yamamoto R, Sawamura K, et al. An approach of estimating individual growth curves for young thoroughbred horses based on their birthdays. J Equine Sci. 2014;25(2):29-35doi: 10.1294/jes.25.29.
Onoda, T., Yamamoto, R., Sawamura, K., Murase, H., Nambo, Y., Inoue, Y., Matsui, A., Miyake, T., & Hirai, N. (2014). An approach of estimating individual growth curves for young thoroughbred horses based on their birthdays. Journal of equine science, 25(2), 29-35. https://doi.org/10.1294/jes.25.29
Onoda, Tomoaki, et al. "An approach of estimating individual growth curves for young thoroughbred horses based on their birthdays." Journal of equine science vol. 25,2 (2014): 29-35. doi: https://doi.org/10.1294/jes.25.29
Onoda T, Yamamoto R, Sawamura K, Murase H, Nambo Y, Inoue Y, Matsui A, Miyake T, Hirai N. An approach of estimating individual growth curves for young thoroughbred horses based on their birthdays. J Equine Sci. 2014;25(2):29-35. doi: 10.1294/jes.25.29. Epub 2014 Jun 25. PMID: 25013356; PMCID: PMC4090356.
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Recent Progress in Breast Conserving Therapy: From Experiences in Japan.

Breast cancer (Tokyo, Japan)

Koyama H, Inaji H, Noguchi S, Motomura K.
PMID: 11091751
Breast Cancer. 1996 Dec 20;3(3):151-160. doi: 10.1007/BF02966978.

Breast conserving therapy (BCT) was conducted in 22.1% of breast cancer patients in 1994 in Japan and is being performed with increasing frequency. According to the data already published, 10-27% of patients treated with BCT had a positive surgical...

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Koyama H, Inaji H, Noguchi S, et al. Recent Progress in Breast Conserving Therapy: From Experiences in Japan. Breast Cancer. 1996;3(3):151-160doi: 10.1007/BF02966978.
Koyama, H., Inaji, H., Noguchi, S., & Motomura, K. (1996). Recent Progress in Breast Conserving Therapy: From Experiences in Japan. Breast cancer (Tokyo, Japan), 3(3), 151-160. https://doi.org/10.1007/BF02966978
Koyama, et al. "Recent Progress in Breast Conserving Therapy: From Experiences in Japan." Breast cancer (Tokyo, Japan) vol. 3,3 (1996): 151-160. doi: https://doi.org/10.1007/BF02966978
Koyama H, Inaji H, Noguchi S, Motomura K. Recent Progress in Breast Conserving Therapy: From Experiences in Japan. Breast Cancer. 1996 Dec 20;3(3):151-160. doi: 10.1007/BF02966978. PMID: 11091751.
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Dark-state imaging for two-dimensional mapping of a magnetic field.

Optics letters

Asahi H, Motomura K, Harada K, Mitsunaga M.
PMID: 12879938
Opt Lett. 2003 Jul 01;28(13):1153-5. doi: 10.1364/ol.28.001153.

By imaging the dark states that are due to coherent population trapping in Na atomic vapor, we have succeeded in depicting a spatially inhomogeneous magnetic field. Highly resolved dark lines represent cross sections of the surfaces of constant magnetic...

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Asahi H, Motomura K, Harada K, et al. Dark-state imaging for two-dimensional mapping of a magnetic field. Opt Lett. 2003;28(13):1153-5doi: 10.1364/ol.28.001153.
Asahi, H., Motomura, K., Harada, K., & Mitsunaga, M. (2003). Dark-state imaging for two-dimensional mapping of a magnetic field. Optics letters, 28(13), 1153-5. https://doi.org/10.1364/ol.28.001153
Asahi, Hitoshi, et al. "Dark-state imaging for two-dimensional mapping of a magnetic field." Optics letters vol. 28,13 (2003): 1153-5. doi: https://doi.org/10.1364/ol.28.001153
Asahi H, Motomura K, Harada K, Mitsunaga M. Dark-state imaging for two-dimensional mapping of a magnetic field. Opt Lett. 2003 Jul 01;28(13):1153-5. doi: 10.1364/ol.28.001153. PMID: 12879938.
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Synchronized disappearance of serum HCV-RNA, anti-U1 RNP, anti-La/SS-B, and anti-Scl-70 in a patient with chronic hepatitis.

Hepatology research : the official journal of the Japan Society of Hepatology

Omagari K, Matsuo I, Ohba K, Masuda J, Hazama H, Sakimura K, Kinoshita H, Tsurutani H, Isomoto H, Murase K, Kohno S.
PMID: 11251309
Hepatol Res. 2001 Mar 26;19(3):263-269. doi: 10.1016/s1386-6346(00)00114-5.

The authors report a rare case of chronic hepatitis in whom normalization of serum aminotransferases was associated with disappearance of serum hepatitic C virus (HCV)-ribonucleic acid (RNA), anti-U1 RNP, anti-La/SS-B, and anti-Scl-70 antibodies without treatment of interferon or corticosteroids....

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Omagari K, Matsuo I, Ohba K, et al. Synchronized disappearance of serum HCV-RNA, anti-U1 RNP, anti-La/SS-B, and anti-Scl-70 in a patient with chronic hepatitis. Hepatol Res. 2001;19(3):263-269doi: 10.1016/s1386-6346(00)00114-5.
Omagari, K., Matsuo, I., Ohba, K., Masuda, J., Hazama, H., Sakimura, K., Kinoshita, H., Tsurutani, H., Isomoto, H., Murase, K., & Kohno, S. (2001). Synchronized disappearance of serum HCV-RNA, anti-U1 RNP, anti-La/SS-B, and anti-Scl-70 in a patient with chronic hepatitis. Hepatology research : the official journal of the Japan Society of Hepatology, 19(3), 263-269. https://doi.org/10.1016/s1386-6346(00)00114-5
Omagari, K, et al. "Synchronized disappearance of serum HCV-RNA, anti-U1 RNP, anti-La/SS-B, and anti-Scl-70 in a patient with chronic hepatitis." Hepatology research : the official journal of the Japan Society of Hepatology vol. 19,3 (2001): 263-269. doi: https://doi.org/10.1016/s1386-6346(00)00114-5
Omagari K, Matsuo I, Ohba K, Masuda J, Hazama H, Sakimura K, Kinoshita H, Tsurutani H, Isomoto H, Murase K, Kohno S. Synchronized disappearance of serum HCV-RNA, anti-U1 RNP, anti-La/SS-B, and anti-Scl-70 in a patient with chronic hepatitis. Hepatol Res. 2001 Mar 26;19(3):263-269. doi: 10.1016/s1386-6346(00)00114-5. PMID: 11251309.
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Phyllodes Tumor of the Breast: Pathology, Histogenesis, Diagnosis, and Treatment.

Breast cancer (Tokyo, Japan)

Noguchi S, Aihara T, Motomura K, Inaji H, Imaoka S, Koyama H, Kasugai T, Wada A.
PMID: 11091559
Breast Cancer. 1996 Jun 28;3(2):79-92. doi: 10.1007/BF02966968.

Phyllodes tumor of the breast is histologically unique in that it is composed of epithelial and stromal components. The histogenesis of this disease has remained largely unknown but recently we have obtained interesting information through clonal analysis, and have...

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Noguchi S, Aihara T, Motomura K, et al. Phyllodes Tumor of the Breast: Pathology, Histogenesis, Diagnosis, and Treatment. Breast Cancer. 1996;3(2):79-92doi: 10.1007/BF02966968.
Noguchi, S., Aihara, T., Motomura, K., Inaji, H., Imaoka, S., Koyama, H., Kasugai, T., & Wada, A. (1996). Phyllodes Tumor of the Breast: Pathology, Histogenesis, Diagnosis, and Treatment. Breast cancer (Tokyo, Japan), 3(2), 79-92. https://doi.org/10.1007/BF02966968
Noguchi, et al. "Phyllodes Tumor of the Breast: Pathology, Histogenesis, Diagnosis, and Treatment." Breast cancer (Tokyo, Japan) vol. 3,2 (1996): 79-92. doi: https://doi.org/10.1007/BF02966968
Noguchi S, Aihara T, Motomura K, Inaji H, Imaoka S, Koyama H, Kasugai T, Wada A. Phyllodes Tumor of the Breast: Pathology, Histogenesis, Diagnosis, and Treatment. Breast Cancer. 1996 Jun 28;3(2):79-92. doi: 10.1007/BF02966968. PMID: 11091559.
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Hepatic chymase level in chronic hepatitis: co-localization of chymase with fibrosis.

Hepatology research : the official journal of the Japan Society of Hepatology

Shimizu S, Satomura K, Aramaki T, Katsuta Y, Takano T, Omoto Y.
PMID: 12957209
Hepatol Res. 2003 Sep;27(1):62-66. doi: 10.1016/s1386-6346(03)00194-3.

Chymase, secreted by mast cells, is associated with angiotensin II production and fibrosis of myocardium and renal interstitium. Assuming that chymase also is involved in liver fibrosis, we previously established an enzyme-linked immunosorbent assay for chymase in human liver...

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Shimizu S, Satomura K, Aramaki T, et al. Hepatic chymase level in chronic hepatitis: co-localization of chymase with fibrosis. Hepatol Res. 2003;27(1):62-66doi: 10.1016/s1386-6346(03)00194-3.
Shimizu, S., Satomura, K., Aramaki, T., Katsuta, Y., Takano, T., & Omoto, Y. (2003). Hepatic chymase level in chronic hepatitis: co-localization of chymase with fibrosis. Hepatology research : the official journal of the Japan Society of Hepatology, 27(1), 62-66. https://doi.org/10.1016/s1386-6346(03)00194-3
Shimizu, Shuji, et al. "Hepatic chymase level in chronic hepatitis: co-localization of chymase with fibrosis." Hepatology research : the official journal of the Japan Society of Hepatology vol. 27,1 (2003): 62-66. doi: https://doi.org/10.1016/s1386-6346(03)00194-3
Shimizu S, Satomura K, Aramaki T, Katsuta Y, Takano T, Omoto Y. Hepatic chymase level in chronic hepatitis: co-localization of chymase with fibrosis. Hepatol Res. 2003 Sep;27(1):62-66. doi: 10.1016/s1386-6346(03)00194-3. PMID: 12957209.
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Effects of Aging and Liver Disease upon the Pharmacokinetics of Nipradilol.

Clinical drug investigation

Aramaki T, Katsuta Y, Sekiyama T, Tsutsui H, Kome-Ichi H, Ohsuga M, Satomura K, Yoshimura M.
PMID: 18370546
Clin Drug Investig. 1998;16(3):251-7. doi: 10.2165/00044011-199816030-00009.

OBJECTIVE: The effects of aging and liver disease on the pharmacokinetics of nipradilol were studied after a single oral dose of 6mg.STUDY PARTICIPANTS: Nipradilol was administered to three groups of subjects: younger healthy volunteers with a mean age of...

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Aramaki T, Katsuta Y, Sekiyama T, et al. Effects of Aging and Liver Disease upon the Pharmacokinetics of Nipradilol. Clin Drug Investig. 1998;16(3):251-7doi: 10.2165/00044011-199816030-00009.
Aramaki, T., Katsuta, Y., Sekiyama, T., Tsutsui, H., Kome-Ichi, H., Ohsuga, M., Satomura, K., & Yoshimura, M. (1998). Effects of Aging and Liver Disease upon the Pharmacokinetics of Nipradilol. Clinical drug investigation, 16(3), 251-7. https://doi.org/10.2165/00044011-199816030-00009
Aramaki, T, et al. "Effects of Aging and Liver Disease upon the Pharmacokinetics of Nipradilol." Clinical drug investigation vol. 16,3 (1998): 251-7. doi: https://doi.org/10.2165/00044011-199816030-00009
Aramaki T, Katsuta Y, Sekiyama T, Tsutsui H, Kome-Ichi H, Ohsuga M, Satomura K, Yoshimura M. Effects of Aging and Liver Disease upon the Pharmacokinetics of Nipradilol. Clin Drug Investig. 1998;16(3):251-7. doi: 10.2165/00044011-199816030-00009. PMID: 18370546.
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