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Performance and enhancement of the LZerD protein assembly pipeline in CAPRI 38‐46

pipeline programs

Christoffer C, Terashi G, Shin WH.
GSID: gCcSiBVH7EYJ
C Christoffer, G Terashi, WH Shin… - Proteins: Structure …, 2020 - Wiley Online Library

… protein docking prediction pipeline of our group and the results for Critical Assessment of Prediction of Interactions (CAPRI) rounds 38-46. The pipeline integrates programs developed in our group as well as other existing scoring functions. The core of...

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Christoffer, C., Terashi, G., Shin, W. H., Aderinwale, T., Maddhuri Venkata Subramaniya, S. R., Peterson, L., ... & Kihara, D. (2020). Performance and enhancement of the LZerD protein assembly pipeline in CAPRI 38‐46. Proteins: Structure, Function, and Bioinformatics, 88(8), 948-961.
Christoffer, Charles, et al. "Performance and enhancement of the LZerD protein assembly pipeline in CAPRI 38‐46." Proteins: Structure, Function, and Bioinformatics 88.8 (2020): 948-961.
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Clinical evaluation of olfaction

evaluation

Cain WS, Catalanotto FA.
GSID: AewwmTTLs8gJ
WS Cain, J Gent, FA Catalanotto… - American Journal of …, 1983 - Elsevier

An odor identification test and an odor threshold test offered satisfactory quantitative information on olfactory function in patients with chemosensory complaints. The threshold test used various concentrations of butanol presented in an ascending sequence. On each trial, the …

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Cain, W. S., Gent, J., Catalanotto, F. A., & Goodspeed, R. B. (1983). Clinical evaluation of olfaction. American Journal of Otolaryngology, 4(4), 252-256.
Cain, William S., et al. "Clinical evaluation of olfaction." American Journal of Otolaryngology 4.4 (1983): 252-256.
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The evolution and genomic basis of beetle diversity

STEM and diversification

Ahrens D, McKenna DD, Shin S.
GSID: Fb1joI6PywMJ
DD McKenna, S Shin, D Ahrens… - Proceedings of the …, 2019 - National Acad Sciences

… in net diversification rate—1) along the stem of Buprestoidea and 2) along the stem of … feeding habits, such as leaf mining and seed, stem, and wood boring, which also required dealing …

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McKenna, D. D., Shin, S., Ahrens, D., Balke, M., Beza-Beza, C., Clarke, D. J., ... & Beutel, R. G. (2019). The evolution and genomic basis of beetle diversity. Proceedings of the National Academy of Sciences, 116(49), 24729-24737.
McKenna, Duane D., et al. "The evolution and genomic basis of beetle diversity." Proceedings of the National Academy of Sciences 116.49 (2019): 24729-24737.
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Career motivation of secondary students in STEM: a cross-cultural study between Korea and Indonesia

Stem career programs

Ha M, Rachmatullah A, Roshayanti F, Shin S.
GSID: LxRdSLy1fd4J
S Shin, A Rachmatullah, F Roshayanti, M Ha… - International Journal for …, 2018 - Springer

The purpose of this study was to understand the career motivation of secondary students in science, technology, engineering, and mathematics (STEM) by comparing Korean and Indonesian students. Effects of gender and educational level on students' STEM career motivation were...

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Shin, S., Rachmatullah, A., Roshayanti, F., Ha, M., & Lee, J. K. (2018). Career motivation of secondary students in STEM: a cross-cultural study between Korea and Indonesia. International Journal for Educational and Vocational Guidance, 18(2), 203-231.
Shin, Sein, et al. "Career motivation of secondary students in STEM: a cross-cultural study between Korea and Indonesia." International Journal for Educational and Vocational Guidance 18.2 (2018): 203-231.
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Challenging systemic barriers to promote the inclusion, recruitment, and retention of URM faculty in STEM

STEM training programs

Ortiz-Carpena JF, Shin S, Wherry EJ.
GSID: 0hwbveusfVoJ
JS Campos, EJ Wherry, S Shin, JF Ortiz-Carpena - Cell Host & Microbe, 2021 - Elsevier

… demystifying the pathway to academia, (3) designing a training program for the development and implementation of DEI initiatives in STEM, and (4) establishing partnerships with media …

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Campos, J. S., Wherry, E. J., Shin, S., & Ortiz-Carpena, J. F. (2021). Challenging systemic barriers to promote the inclusion, recruitment, and retention of URM faculty in STEM. Cell Host & Microbe, 29(6), 862-866.
Campos, Jose S., et al. "Challenging systemic barriers to promote the inclusion, recruitment, and retention of URM faculty in STEM." Cell Host & Microbe 29.6 (2021): 862-866.
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Developing an integrative STEM curriculum for robotics education through educational design research

stem intervention research

Kopcha TJ, Shin S.
GSID: yDjCEhB3cocJ
TJ Kopcha, J McGregor, S Shin, Y Qian, J Choi… - Journal of Formative …, 2017 - Springer

This paper presents an integrative standards-based STEM curriculum that uses robots to develop students' computational thinking. The need for the project is rooted in both the overall lack of existing materials as well as the need for materials that...

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Kopcha, T. J., McGregor, J., Shin, S., Qian, Y., Choi, J., Hill, R., ... & Choi, I. (2017). Developing an integrative STEM curriculum for robotics education through educational design research. Journal of Formative Design in Learning, 1(1), 31-44.
Kopcha, T. J., et al. "Developing an integrative STEM curriculum for robotics education through educational design research." Journal of Formative Design in Learning 1.1 (2017): 31-44.
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Strongly spin-orbit coupled two-dimensional electron gas emerging near the surface of polar semiconductors.

Physical review letters

Sakano M, Bahramy MS, Katayama A, Shimojima T, Murakawa H, Kaneko Y, Malaeb W, Shin S, Ono K, Kumigashira H, Arita R, Nagaosa N, Hwang HY, Tokura Y, Ishizaka K.
PMID: 23521291
Phys Rev Lett. 2013 Mar 08;110(10):107204. doi: 10.1103/PhysRevLett.110.107204. Epub 2013 Mar 07.

We investigate the two-dimensional highly spin-polarized electron accumulation layers commonly appearing near the surface of n-type polar semiconductors BiTeX (X=I, Br, and Cl) by angular-resolved photoemission spectroscopy. Because of the polarity and the strong spin-orbit interaction built in the...

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Sakano M, Bahramy MS, Katayama A, et al. Strongly spin-orbit coupled two-dimensional electron gas emerging near the surface of polar semiconductors. Phys Rev Lett. 2013;110(10):107204doi: 10.1103/PhysRevLett.110.107204.
Sakano, M., Bahramy, M. S., Katayama, A., Shimojima, T., Murakawa, H., Kaneko, Y., Malaeb, W., Shin, S., Ono, K., Kumigashira, H., Arita, R., Nagaosa, N., Hwang, H. Y., Tokura, Y., & Ishizaka, K. (2013). Strongly spin-orbit coupled two-dimensional electron gas emerging near the surface of polar semiconductors. Physical review letters, 110(10), 107204. https://doi.org/10.1103/PhysRevLett.110.107204
Sakano, M, et al. "Strongly spin-orbit coupled two-dimensional electron gas emerging near the surface of polar semiconductors." Physical review letters vol. 110,10 (2013): 107204. doi: https://doi.org/10.1103/PhysRevLett.110.107204
Sakano M, Bahramy MS, Katayama A, Shimojima T, Murakawa H, Kaneko Y, Malaeb W, Shin S, Ono K, Kumigashira H, Arita R, Nagaosa N, Hwang HY, Tokura Y, Ishizaka K. Strongly spin-orbit coupled two-dimensional electron gas emerging near the surface of polar semiconductors. Phys Rev Lett. 2013 Mar 08;110(10):107204. doi: 10.1103/PhysRevLett.110.107204. Epub 2013 Mar 07. PMID: 23521291.
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Is microsatellite instability really a good prognostic factor of colorectal cancer?.

Annals of coloproctology

Shin US, Cho SS, Moon SM, Park SH, Jee SH, Jung EJ, Hwang DY.
PMID: 24639968
Ann Coloproctol. 2014 Feb;30(1):28-34. doi: 10.3393/ac.2014.30.1.28. Epub 2014 Feb 28.

PURPOSE: The aim of this study was to investigate the clinicopathologic features of and the prognosis for colorectal cancers (CRCs) with microsatellite instabilities (MSIs).METHODS: Between 2006 and 2009, genotyping was performed on 245 patients with stage II/III CRCs to...

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Shin US, Cho SS, Moon SM, et al. Is microsatellite instability really a good prognostic factor of colorectal cancer?. Ann Coloproctol. 2014;30(1):28-34doi: 10.3393/ac.2014.30.1.28.
Shin, U. S., Cho, S. S., Moon, S. M., Park, S. H., Jee, S. H., Jung, E. J., & Hwang, D. Y. (2014). Is microsatellite instability really a good prognostic factor of colorectal cancer?. Annals of coloproctology, 30(1), 28-34. https://doi.org/10.3393/ac.2014.30.1.28
Shin, Ui Sup, et al. "Is microsatellite instability really a good prognostic factor of colorectal cancer?." Annals of coloproctology vol. 30,1 (2014): 28-34. doi: https://doi.org/10.3393/ac.2014.30.1.28
Shin US, Cho SS, Moon SM, Park SH, Jee SH, Jung EJ, Hwang DY. Is microsatellite instability really a good prognostic factor of colorectal cancer?. Ann Coloproctol. 2014 Feb;30(1):28-34. doi: 10.3393/ac.2014.30.1.28. Epub 2014 Feb 28. PMID: 24639968; PMCID: PMC3953166.
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Enhanced efficacy of human brain-derived neural stem cells by transplantation of cell aggregates in a rat model of Parkinson's disease.

Journal of Korean Neurosurgical Society

Shin ES, Hwang O, Hwang YS, Suh JK, Chun YI, Jeon SR.
PMID: 25535514
J Korean Neurosurg Soc. 2014 Nov;56(5):383-9. doi: 10.3340/jkns.2014.56.5.383. Epub 2014 Nov 30.

OBJECTIVE: Neural tissue transplantation has been a promising strategy for the treatment of Parkinson's disease (PD). However, transplantation has the disadvantages of low-cell survival and/or development of dyskinesia. Transplantation of cell aggregates has the potential to overcome these problems,...

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Shin ES, Hwang O, Hwang YS, et al. Enhanced efficacy of human brain-derived neural stem cells by transplantation of cell aggregates in a rat model of Parkinson's disease. J Korean Neurosurg Soc. 2014;56(5):383-9doi: 10.3340/jkns.2014.56.5.383.
Shin, E. S., Hwang, O., Hwang, Y. S., Suh, J. K., Chun, Y. I., & Jeon, S. R. (2014). Enhanced efficacy of human brain-derived neural stem cells by transplantation of cell aggregates in a rat model of Parkinson's disease. Journal of Korean Neurosurgical Society, 56(5), 383-9. https://doi.org/10.3340/jkns.2014.56.5.383
Shin, Eun Sil, et al. "Enhanced efficacy of human brain-derived neural stem cells by transplantation of cell aggregates in a rat model of Parkinson's disease." Journal of Korean Neurosurgical Society vol. 56,5 (2014): 383-9. doi: https://doi.org/10.3340/jkns.2014.56.5.383
Shin ES, Hwang O, Hwang YS, Suh JK, Chun YI, Jeon SR. Enhanced efficacy of human brain-derived neural stem cells by transplantation of cell aggregates in a rat model of Parkinson's disease. J Korean Neurosurg Soc. 2014 Nov;56(5):383-9. doi: 10.3340/jkns.2014.56.5.383. Epub 2014 Nov 30. PMID: 25535514; PMCID: PMC4272995.
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Intravascular large B-cell lymphoma complicated by invasive pulmonary aspergillosis: a rare presentation.

Respirology case reports

Mahasneh T, Harrington Z, Williamson J, Alkhawaja D, Duflou J, Shin JS.
PMID: 25473570
Respirol Case Rep. 2014 Jun;2(2):67-9. doi: 10.1002/rcr2.51. Epub 2014 Feb 25.

We describe a patient with persisting fevers, a progressive pulmonary infiltrate, and high levels of serum lactate dehydrogenase. No underlying cause for these changes was found prior to her death despite extensive investigations. Postmortem tissue revealed invasive pulmonary aspergillosis...

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Mahasneh T, Harrington Z, Williamson J, et al. Intravascular large B-cell lymphoma complicated by invasive pulmonary aspergillosis: a rare presentation. Respirol Case Rep. 2014;2(2):67-9doi: 10.1002/rcr2.51.
Mahasneh, T., Harrington, Z., Williamson, J., Alkhawaja, D., Duflou, J., & Shin, J. S. (2014). Intravascular large B-cell lymphoma complicated by invasive pulmonary aspergillosis: a rare presentation. Respirology case reports, 2(2), 67-9. https://doi.org/10.1002/rcr2.51
Mahasneh, Tamadur, et al. "Intravascular large B-cell lymphoma complicated by invasive pulmonary aspergillosis: a rare presentation." Respirology case reports vol. 2,2 (2014): 67-9. doi: https://doi.org/10.1002/rcr2.51
Mahasneh T, Harrington Z, Williamson J, Alkhawaja D, Duflou J, Shin JS. Intravascular large B-cell lymphoma complicated by invasive pulmonary aspergillosis: a rare presentation. Respirol Case Rep. 2014 Jun;2(2):67-9. doi: 10.1002/rcr2.51. Epub 2014 Feb 25. PMID: 25473570; PMCID: PMC4184509.
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Treadmill exercise alleviates nigrostriatal dopaminergic loss of neurons and fibers in rotenone-induced Parkinson rats.

Journal of exercise rehabilitation

Shin MS, Kim TW, Lee JM, Ji ES, Lim BV.
PMID: 28349030
J Exerc Rehabil. 2017 Feb 28;13(1):30-35. doi: 10.12965/jer.1734906.453. eCollection 2017 Feb.

Parkinson disease is one of the common brain diseases caused by dopaminergic neuronal loss in the substantia nigra and dopaminergic fiber loss in the striatum. In the present study, the effects of treadmill exercise on motor performance, dopaminergic loss...

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Shin MS, Kim TW, Lee JM, et al. Treadmill exercise alleviates nigrostriatal dopaminergic loss of neurons and fibers in rotenone-induced Parkinson rats. J Exerc Rehabil. 2017;13(1):30-35doi: 10.12965/jer.1734906.453.
Shin, M. S., Kim, T. W., Lee, J. M., Ji, E. S., & Lim, B. V. (2017). Treadmill exercise alleviates nigrostriatal dopaminergic loss of neurons and fibers in rotenone-induced Parkinson rats. Journal of exercise rehabilitation, 13(1), 30-35. https://doi.org/10.12965/jer.1734906.453
Shin, Mal-Soon, et al. "Treadmill exercise alleviates nigrostriatal dopaminergic loss of neurons and fibers in rotenone-induced Parkinson rats." Journal of exercise rehabilitation vol. 13,1 (2017): 30-35. doi: https://doi.org/10.12965/jer.1734906.453
Shin MS, Kim TW, Lee JM, Ji ES, Lim BV. Treadmill exercise alleviates nigrostriatal dopaminergic loss of neurons and fibers in rotenone-induced Parkinson rats. J Exerc Rehabil. 2017 Feb 28;13(1):30-35. doi: 10.12965/jer.1734906.453. eCollection 2017 Feb. PMID: 28349030; PMCID: PMC5331996.
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Improved efficiency of red phosphorescent organic light-emitting diodes with combination of heterojunction and mixed host structure.

Journal of nanoscience and nanotechnology

Lim DH, Lee SJ, Koo JR, Kim BY, Shin HS, Lee KH, Lee SY, Kim WY, Yoon SS, Kim YK.
PMID: 25936044
J Nanosci Nanotechnol. 2014 Aug;14(8):5998-6001. doi: 10.1166/jnn.2014.8442.

We report an improvement of efficiency in red phosphorescent organic light-emitting diodes (PHOLEDs) based on a combination of heterojunction (HJ) structure and mixed host (MH) system using a phosphorescent red emitter: bis(2-phenylquinolinato)-acetylacetonate iridium III [Ir(pq)2(acac)] doped in 4,4,N,N'-dicarbazolebiphenyl (CBP)...

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Lim DH, Lee SJ, Koo JR, et al. Improved efficiency of red phosphorescent organic light-emitting diodes with combination of heterojunction and mixed host structure. J Nanosci Nanotechnol. 2014;14(8):5998-6001doi: 10.1166/jnn.2014.8442.
Lim, D. H., Lee, S. J., Koo, J. R., Kim, B. Y., Shin, H. S., Lee, K. H., Lee, S. Y., Kim, W. Y., Yoon, S. S., & Kim, Y. K. (2014). Improved efficiency of red phosphorescent organic light-emitting diodes with combination of heterojunction and mixed host structure. Journal of nanoscience and nanotechnology, 14(8), 5998-6001. https://doi.org/10.1166/jnn.2014.8442
Lim, Dong Hwan, et al. "Improved efficiency of red phosphorescent organic light-emitting diodes with combination of heterojunction and mixed host structure." Journal of nanoscience and nanotechnology vol. 14,8 (2014): 5998-6001. doi: https://doi.org/10.1166/jnn.2014.8442
Lim DH, Lee SJ, Koo JR, Kim BY, Shin HS, Lee KH, Lee SY, Kim WY, Yoon SS, Kim YK. Improved efficiency of red phosphorescent organic light-emitting diodes with combination of heterojunction and mixed host structure. J Nanosci Nanotechnol. 2014 Aug;14(8):5998-6001. doi: 10.1166/jnn.2014.8442. PMID: 25936044.
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Showing 1 to 12 of 3850 entries