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hagis, an R Package Resource for Pathotype Analysis of Phytophthora sojae Populations Causing Stem and Root Rot of Soybean

STEM and diversity

McCoy AG, Noel Z, Sparks AH.
GSID: bLSAJKIAQJwJ
AG McCoy, Z Noel, AH Sparks… - Molecular Plant …, 2019 - Am Phytopath Society

… Valuable measurements for pathotype analysis include the distribution of susceptible reactions, pathotype complexity, pathotype frequency, and diversity indices for pathotype …

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McCoy, A. G., Noel, Z., Sparks, A. H., & Chilvers, M. (2019). hagis, an R package resource for pathotype analysis of Phytophthora sojae populations causing stem and root rot of soybean. Molecular Plant-Microbe Interactions, 32(12), 1574-1576.
McCoy, Austin G., et al. "hagis, an R package resource for pathotype analysis of Phytophthora sojae populations causing stem and root rot of soybean." Molecular Plant-Microbe Interactions 32.12 (2019): 1574-1576.
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Anxiety about foreign language learning among high school women

high school

Sparks R.
GSID: n0Bj38kQdH4J
L Ganschow, R Sparks - The Modern Language Journal, 1996 - Wiley Online Library

… eign language aptitude measures among 154 high school foreign language learners. Three … native language skills and foreign language aptitude than High Anxiety (HI-ANX), students …

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Ganschow, L., & Sparks, R. (1996). Anxiety about foreign language learning among high school women. The Modern Language Journal, 80(2), 199-212.
Ganschow, Leonore, and Richard Sparks. "Anxiety about foreign language learning among high school women." The Modern Language Journal 80.2 (1996): 199-212.
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Reducing stereotype threat in the science and mathematics classroom: An overview of research, best practices, and intervention strategies

stereotype threat

Sparks D.
GSID: tDVpIoYyAqwJ
D Sparks - CurrentsACADEMIC, 2016 - webcdn.worcester.edu

… Stereotype threat research is relatively new in the world of … Stereotype threat research has taken a welcome direction in … that contribute to reducing the threat to students in classrooms …

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Sparks, D. (2016). Reducing stereotype threat in the science and mathematics classroom: An overview of research, best practices, and intervention strategies. CurrentsACADEMIC, 5.
Sparks, David. "Reducing stereotype threat in the science and mathematics classroom: An overview of research, best practices, and intervention strategies." CurrentsACADEMIC (2016): 5.
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Initiation of our second century.

The Physiologist

Sparks HV.
PMID: 3406144
Physiologist. 1988 Jun;31(3):37-8, 54.

No abstract available.

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Sparks HV. Initiation of our second century. Physiologist. 1988;31(3):37-8, 54
Sparks, H. V. (1988). Initiation of our second century. The Physiologist, 31(3), 37-8, 54.
Sparks, H V. "Initiation of our second century." The Physiologist vol. 31,3 (1988): 37-8, 54.
Sparks HV. Initiation of our second century. Physiologist. 1988 Jun;31(3):37-8, 54. PMID: 3406144.
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Bacteria Isolated From the Skin of Congo African Grey Parrots ( Psittacus erithacus ), Budgerigars ( Melopsittacus undulatus ), and Cockatiels ( Nymphicus hollandicus ).

Journal of avian medicine and surgery

Lamb S, Sobczynski A, Starks D, Sitinas N.
PMID: 25843464
J Avian Med Surg. 2014 Dec;28(4):275-9. doi: 10.1647/1082-6742-28.4.275.

Little is known about the normal bacterial flora of the skin of birds. To identify the bacterial organisms that reside on the integument of companion psittacine birds in a normal physiologic state, skin cultures were taken from 75 psittacine...

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Lamb S, Sobczynski A, Starks D, et al. Bacteria Isolated From the Skin of Congo African Grey Parrots ( Psittacus erithacus ), Budgerigars ( Melopsittacus undulatus ), and Cockatiels ( Nymphicus hollandicus ). J Avian Med Surg. 2014;28(4):275-9doi: 10.1647/1082-6742-28.4.275.
Lamb, S., Sobczynski, A., Starks, D., & Sitinas, N. (2014). Bacteria Isolated From the Skin of Congo African Grey Parrots ( Psittacus erithacus ), Budgerigars ( Melopsittacus undulatus ), and Cockatiels ( Nymphicus hollandicus ). Journal of avian medicine and surgery, 28(4), 275-9. https://doi.org/10.1647/1082-6742-28.4.275
Lamb, Stephanie, et al. "Bacteria Isolated From the Skin of Congo African Grey Parrots ( Psittacus erithacus ), Budgerigars ( Melopsittacus undulatus ), and Cockatiels ( Nymphicus hollandicus )." Journal of avian medicine and surgery vol. 28,4 (2014): 275-9. doi: https://doi.org/10.1647/1082-6742-28.4.275
Lamb S, Sobczynski A, Starks D, Sitinas N. Bacteria Isolated From the Skin of Congo African Grey Parrots ( Psittacus erithacus ), Budgerigars ( Melopsittacus undulatus ), and Cockatiels ( Nymphicus hollandicus ). J Avian Med Surg. 2014 Dec;28(4):275-9. doi: 10.1647/1082-6742-28.4.275. PMID: 25843464.
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Two independent and primitive envelopes of the bilobate nucleus of comet 67P.

Nature

Massironi M, Simioni E, Marzari F, Cremonese G, Giacomini L, Pajola M, Jorda L, Naletto G, Lowry S, El-Maarry MR, Preusker F, Scholten F, Sierks H, Barbieri C, Lamy P, Rodrigo R, Koschny D, Rickman H, Keller HU, A'Hearn MF, Agarwal J, Auger AT, Barucci MA, Bertaux JL, Bertini I, Besse S, Bodewits D, Capanna C, Da Deppo V, Davidsson B, Debei S, De Cecco M, Ferri F, Fornasier S, Fulle M, Gaskell R, Groussin O, Gutiérrez PJ, Güttler C, Hviid SF, Ip WH, Knollenberg J, Kovacs G, Kramm R, Kührt E, Küppers M, La Forgia F, Lara LM, Lazzarin M, Lin ZY, Lopez Moreno JJ, Magrin S, Michalik H, Mottola S, Oklay N, Pommerol A, Thomas N, Tubiana C, Vincent JB.
PMID: 26416730
Nature. 2015 Oct 15;526(7573):402-5. doi: 10.1038/nature15511. Epub 2015 Sep 28.

The factors shaping cometary nuclei are still largely unknown, but could be the result of concurrent effects of evolutionary and primordial processes. The peculiar bilobed shape of comet 67P/Churyumov-Gerasimenko may be the result of the fusion of two objects...

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Massironi M, Simioni E, Marzari F, et al. Two independent and primitive envelopes of the bilobate nucleus of comet 67P. Nature. 2015;526(7573):402-5doi: 10.1038/nature15511.
Massironi, M., Simioni, E., Marzari, F., Cremonese, G., Giacomini, L., Pajola, M., Jorda, L., Naletto, G., Lowry, S., El-Maarry, M. R., Preusker, F., Scholten, F., Sierks, H., Barbieri, C., Lamy, P., Rodrigo, R., Koschny, D., Rickman, H., Keller, H. U., A'Hearn, M. F., Agarwal, J., Auger, A. T., Barucci, M. A., Bertaux, J. L., Bertini, I., Besse, S., Bodewits, D., Capanna, C., Da Deppo, V., Davidsson, B., Debei, S., De Cecco, M., Ferri, F., Fornasier, S., Fulle, M., Gaskell, R., Groussin, O., Gutiérrez, P. J., Güttler, C., Hviid, S. F., Ip, W. H., Knollenberg, J., Kovacs, G., Kramm, R., Kührt, E., Küppers, M., La Forgia, F., Lara, L. M., Lazzarin, M., Lin, Z. Y., Lopez Moreno, J. J., Magrin, S., Michalik, H., Mottola, S., Oklay, N., Pommerol, A., Thomas, N., Tubiana, C., & Vincent, J. B. (2015). Two independent and primitive envelopes of the bilobate nucleus of comet 67P. Nature, 526(7573), 402-5. https://doi.org/10.1038/nature15511
Massironi, Matteo, et al. "Two independent and primitive envelopes of the bilobate nucleus of comet 67P." Nature vol. 526,7573 (2015): 402-5. doi: https://doi.org/10.1038/nature15511
Massironi M, Simioni E, Marzari F, Cremonese G, Giacomini L, Pajola M, Jorda L, Naletto G, Lowry S, El-Maarry MR, Preusker F, Scholten F, Sierks H, Barbieri C, Lamy P, Rodrigo R, Koschny D, Rickman H, Keller HU, A'Hearn MF, Agarwal J, Auger AT, Barucci MA, Bertaux JL, Bertini I, Besse S, Bodewits D, Capanna C, Da Deppo V, Davidsson B, Debei S, De Cecco M, Ferri F, Fornasier S, Fulle M, Gaskell R, Groussin O, Gutiérrez PJ, Güttler C, Hviid SF, Ip WH, Knollenberg J, Kovacs G, Kramm R, Kührt E, Küppers M, La Forgia F, Lara LM, Lazzarin M, Lin ZY, Lopez Moreno JJ, Magrin S, Michalik H, Mottola S, Oklay N, Pommerol A, Thomas N, Tubiana C, Vincent JB. Two independent and primitive envelopes of the bilobate nucleus of comet 67P. Nature. 2015 Oct 15;526(7573):402-5. doi: 10.1038/nature15511. Epub 2015 Sep 28. PMID: 26416730.
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Ceramide synthesis regulates T cell activity and GVHD development.

JCI insight

Sofi MH, Heinrichs J, Dany M, Nguyen H, Dai M, Bastian D, Schutt S, Wu Y, Daenthanasanmak A, Gencer S, Zivkovic A, Szulc Z, Stark H, Liu C, Chang YJ, Ogretmen B, Yu XZ.
PMID: 28515365
JCI Insight. 2017 May 18;2(10). doi: 10.1172/jci.insight.91701. eCollection 2017 May 18.

Allogeneic hematopoietic cell transplantation (allo-HCT) is an effective immunotherapy for a variety of hematologic malignances, yet its efficacy is impeded by the development of graft-versus-host disease (GVHD). GVHD is characterized by activation, expansion, cytokine production, and migration of alloreactive...

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Sofi MH, Heinrichs J, Dany M, et al. Ceramide synthesis regulates T cell activity and GVHD development. JCI Insight. 2017;2(10)doi: 10.1172/jci.insight.91701.
Sofi, M. H., Heinrichs, J., Dany, M., Nguyen, H., Dai, M., Bastian, D., Schutt, S., Wu, Y., Daenthanasanmak, A., Gencer, S., Zivkovic, A., Szulc, Z., Stark, H., Liu, C., Chang, Y. J., Ogretmen, B., & Yu, X. Z. (2017). Ceramide synthesis regulates T cell activity and GVHD development. JCI insight, 2(10), . https://doi.org/10.1172/jci.insight.91701
Sofi, M Hanief, et al. "Ceramide synthesis regulates T cell activity and GVHD development." JCI insight vol. 2,10 (2017). doi: https://doi.org/10.1172/jci.insight.91701
Sofi MH, Heinrichs J, Dany M, Nguyen H, Dai M, Bastian D, Schutt S, Wu Y, Daenthanasanmak A, Gencer S, Zivkovic A, Szulc Z, Stark H, Liu C, Chang YJ, Ogretmen B, Yu XZ. Ceramide synthesis regulates T cell activity and GVHD development. JCI Insight. 2017 May 18;2(10). doi: 10.1172/jci.insight.91701. eCollection 2017 May 18. PMID: 28515365; PMCID: PMC5436544.
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Achieving Optimal Therapeutic Hypothermia on Transport.

Advances in neonatal care : official journal of the National Association of Neonatal Nurses

Schump E, Lancaster T, Sparks D, Weatherstone K, Holcomb R.
PMID: 27533331
Adv Neonatal Care. 2016 Oct;16(5):E3-E10. doi: 10.1097/ANC.0000000000000323.

BACKGROUND: Early initiation of therapeutic hypothermia (TH) for the treatment of hypoxic ischemic encephalopathy (HIE) has been shown to improve outcomes. Many of these patients require transport to treatment facilities. At the time of the study, there were no...

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Schump E, Lancaster T, Sparks D, et al. Achieving Optimal Therapeutic Hypothermia on Transport. Adv Neonatal Care. 2016;16(5):E3-E10doi: 10.1097/ANC.0000000000000323.
Schump, E., Lancaster, T., Sparks, D., Weatherstone, K., & Holcomb, R. (2016). Achieving Optimal Therapeutic Hypothermia on Transport. Advances in neonatal care : official journal of the National Association of Neonatal Nurses, 16(5), E3-E10. https://doi.org/10.1097/ANC.0000000000000323
Schump, Elizabeth, et al. "Achieving Optimal Therapeutic Hypothermia on Transport." Advances in neonatal care : official journal of the National Association of Neonatal Nurses vol. 16,5 (2016): E3-E10. doi: https://doi.org/10.1097/ANC.0000000000000323
Schump E, Lancaster T, Sparks D, Weatherstone K, Holcomb R. Achieving Optimal Therapeutic Hypothermia on Transport. Adv Neonatal Care. 2016 Oct;16(5):E3-E10. doi: 10.1097/ANC.0000000000000323. PMID: 27533331.
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Surface changes on comet 67P/Churyumov-Gerasimenko suggest a more active past.

Science (New York, N.Y.)

El-Maarry MR, Groussin O, Thomas N, Pajola M, Auger AT, Davidsson B, Hu X, Hviid SF, Knollenberg J, Güttler C, Tubiana C, Fornasier S, Feller C, Hasselmann P, Vincent JB, Sierks H, Barbieri C, Lamy P, Rodrigo R, Koschny D, Keller HU, Rickman H, A'Hearn MF, Barucci MA, Bertaux JL, Bertini I, Besse S, Bodewits D, Cremonese G, Da Deppo V, Debei S, De Cecco M, Deller J, Deshapriya JD, Fulle M, Gutierrez PJ, Hofmann M, Ip WH, Jorda L, Kovacs G, Kramm JR, Kührt E, Küppers M, Lara LM, Lazzarin M, Lin ZY, Lopez Moreno JJ, Marchi S, Marzari F, Mottola S, Naletto G, Oklay N, Pommerol A, Preusker F, Scholten F, Shi X.
PMID: 28325842
Science. 2017 Mar 31;355(6332):1392-1395. doi: 10.1126/science.aak9384. Epub 2017 Mar 21.

The Rosetta spacecraft spent ~2 years orbiting comet 67P/Churyumov-Gerasimenko, most of it at distances that allowed surface characterization and monitoring at submeter scales. From December 2014 to June 2016, numerous localized changes were observed, which we attribute to cometary-specific...

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El-Maarry MR, Groussin O, Thomas N, et al. Surface changes on comet 67P/Churyumov-Gerasimenko suggest a more active past. Science. 2017;355(6332):1392-1395doi: 10.1126/science.aak9384.
El-Maarry, M. R., Groussin, O., Thomas, N., Pajola, M., Auger, A. T., Davidsson, B., Hu, X., Hviid, S. F., Knollenberg, J., Güttler, C., Tubiana, C., Fornasier, S., Feller, C., Hasselmann, P., Vincent, J. B., Sierks, H., Barbieri, C., Lamy, P., Rodrigo, R., Koschny, D., Keller, H. U., Rickman, H., A'Hearn, M. F., Barucci, M. A., Bertaux, J. L., Bertini, I., Besse, S., Bodewits, D., Cremonese, G., Da Deppo, V., Debei, S., De Cecco, M., Deller, J., Deshapriya, J. D., Fulle, M., Gutierrez, P. J., Hofmann, M., Ip, W. H., Jorda, L., Kovacs, G., Kramm, J. R., Kührt, E., Küppers, M., Lara, L. M., Lazzarin, M., Lin, Z. Y., Lopez Moreno, J. J., Marchi, S., Marzari, F., Mottola, S., Naletto, G., Oklay, N., Pommerol, A., Preusker, F., Scholten, F., & Shi, X. (2017). Surface changes on comet 67P/Churyumov-Gerasimenko suggest a more active past. Science (New York, N.Y.), 355(6332), 1392-1395. https://doi.org/10.1126/science.aak9384
El-Maarry, M Ramy, et al. "Surface changes on comet 67P/Churyumov-Gerasimenko suggest a more active past." Science (New York, N.Y.) vol. 355,6332 (2017): 1392-1395. doi: https://doi.org/10.1126/science.aak9384
El-Maarry MR, Groussin O, Thomas N, Pajola M, Auger AT, Davidsson B, Hu X, Hviid SF, Knollenberg J, Güttler C, Tubiana C, Fornasier S, Feller C, Hasselmann P, Vincent JB, Sierks H, Barbieri C, Lamy P, Rodrigo R, Koschny D, Keller HU, Rickman H, A'Hearn MF, Barucci MA, Bertaux JL, Bertini I, Besse S, Bodewits D, Cremonese G, Da Deppo V, Debei S, De Cecco M, Deller J, Deshapriya JD, Fulle M, Gutierrez PJ, Hofmann M, Ip WH, Jorda L, Kovacs G, Kramm JR, Kührt E, Küppers M, Lara LM, Lazzarin M, Lin ZY, Lopez Moreno JJ, Marchi S, Marzari F, Mottola S, Naletto G, Oklay N, Pommerol A, Preusker F, Scholten F, Shi X. Surface changes on comet 67P/Churyumov-Gerasimenko suggest a more active past. Science. 2017 Mar 31;355(6332):1392-1395. doi: 10.1126/science.aak9384. Epub 2017 Mar 21. PMID: 28325842.
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The effect of microbial challenge on the intestinal proteome of broiler chickens.

Proteome science

O'Reilly EL, Burchmore RJ, Sparks NH, Eckersall PD.
PMID: 28572745
Proteome Sci. 2017 May 30;15:10. doi: 10.1186/s12953-017-0118-0. eCollection 2016.

BACKGROUND: In poultry production intestinal health and function is paramount to achieving efficient feed utilisation and growth. Uncovering the localised molecular mechanisms that occur during the early and important periods of growth that allow birds to grow optimally is...

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O'Reilly EL, Burchmore RJ, Sparks NH, et al. The effect of microbial challenge on the intestinal proteome of broiler chickens. Proteome Sci. 2017;15:10doi: 10.1186/s12953-017-0118-0.
O'Reilly, E. L., Burchmore, R. J., Sparks, N. H., & Eckersall, P. D. (2016). The effect of microbial challenge on the intestinal proteome of broiler chickens. Proteome science, 1510. https://doi.org/10.1186/s12953-017-0118-0
O'Reilly, Emily L, et al. "The effect of microbial challenge on the intestinal proteome of broiler chickens." Proteome science vol. 15 (2016): 10. doi: https://doi.org/10.1186/s12953-017-0118-0
O'Reilly EL, Burchmore RJ, Sparks NH, Eckersall PD. The effect of microbial challenge on the intestinal proteome of broiler chickens. Proteome Sci. 2017 May 30;15:10. doi: 10.1186/s12953-017-0118-0. eCollection 2016. PMID: 28572745; PMCID: PMC5450085.
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Phase separation and coexistence of hydrodynamically interacting microswimmers.

Soft matter

Blaschke J, Maurer M, Menon K, Zöttl A, Stark H.
PMID: 27869284
Soft Matter. 2016 Dec 06;12(48):9821-9831. doi: 10.1039/c6sm02042a.

A striking feature of the collective behavior of spherical microswimmers is that for sufficiently strong self-propulsion they phase-separate into a dense cluster coexisting with a low-density disordered surrounding. Extending our previous work, we use the squirmer as a model...

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Blaschke J, Maurer M, Menon K, et al. Phase separation and coexistence of hydrodynamically interacting microswimmers. Soft Matter. 2016;12(48):9821-9831doi: 10.1039/c6sm02042a.
Blaschke, J., Maurer, M., Menon, K., Zöttl, A., & Stark, H. (2016). Phase separation and coexistence of hydrodynamically interacting microswimmers. Soft matter, 12(48), 9821-9831. https://doi.org/10.1039/c6sm02042a
Blaschke, Johannes, et al. "Phase separation and coexistence of hydrodynamically interacting microswimmers." Soft matter vol. 12,48 (2016): 9821-9831. doi: https://doi.org/10.1039/c6sm02042a
Blaschke J, Maurer M, Menon K, Zöttl A, Stark H. Phase separation and coexistence of hydrodynamically interacting microswimmers. Soft Matter. 2016 Dec 06;12(48):9821-9831. doi: 10.1039/c6sm02042a. PMID: 27869284.
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Assessing the Impact of Stricter Alcohol Advertising Standards: The Case of Beam Global Spirits.

Journal of public affairs

Ross CS, Sparks A, Jernigan DH.
PMID: 28042284
J Public Aff. 2016 Aug;16(3):245-254. doi: 10.1002/pa.1584. Epub 2015 Sep 30.

Reducing youth exposure to alcohol advertising is a global health priority. In most countries around the world, the alcohol industry is given the opportunity to regulate itself with respect to advertising practices. Generally, the alcohol industry self-regulations are lax,...

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Ross CS, Sparks A, Jernigan DH. Assessing the Impact of Stricter Alcohol Advertising Standards: The Case of Beam Global Spirits. J Public Aff. 2015;16(3):245-254doi: 10.1002/pa.1584.
Ross, C. S., Sparks, A., & Jernigan, D. H. (2016). Assessing the Impact of Stricter Alcohol Advertising Standards: The Case of Beam Global Spirits. Journal of public affairs, 16(3), 245-254. https://doi.org/10.1002/pa.1584
Ross, Craig S, et al. "Assessing the Impact of Stricter Alcohol Advertising Standards: The Case of Beam Global Spirits." Journal of public affairs vol. 16,3 (2016): 245-254. doi: https://doi.org/10.1002/pa.1584
Ross CS, Sparks A, Jernigan DH. Assessing the Impact of Stricter Alcohol Advertising Standards: The Case of Beam Global Spirits. J Public Aff. 2016 Aug;16(3):245-254. doi: 10.1002/pa.1584. Epub 2015 Sep 30. PMID: 28042284; PMCID: PMC5198782.
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