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Heterogeneity in the kinetics of nuclear proteins and trajectories of substructures associated with heterochromatin.

Epigenetics & chromatin

Stixová L, Bártová E, Matula P, Daněk O, Legartová S, Kozubek S.
PMID: 21418567
Epigenetics Chromatin. 2011 Mar 18;4:5. doi: 10.1186/1756-8935-4-5.

BACKGROUND: Protein exchange kinetics correlate with the level of chromatin condensation and, in many cases, with the level of transcription. We used fluorescence recovery after photobleaching (FRAP) to analyse the kinetics of 18 proteins and determine the relationships between...

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Stixová L, Bártová E, Matula P, et al. Heterogeneity in the kinetics of nuclear proteins and trajectories of substructures associated with heterochromatin. Epigenetics Chromatin. 2011;4:5doi: 10.1186/1756-8935-4-5.
Stixová, L., Bártová, E., Matula, P., Daněk, O., Legartová, S., & Kozubek, S. (2011). Heterogeneity in the kinetics of nuclear proteins and trajectories of substructures associated with heterochromatin. Epigenetics & chromatin, 45. https://doi.org/10.1186/1756-8935-4-5
Stixová, Lenka, et al. "Heterogeneity in the kinetics of nuclear proteins and trajectories of substructures associated with heterochromatin." Epigenetics & chromatin vol. 4 (2011): 5. doi: https://doi.org/10.1186/1756-8935-4-5
Stixová L, Bártová E, Matula P, Daněk O, Legartová S, Kozubek S. Heterogeneity in the kinetics of nuclear proteins and trajectories of substructures associated with heterochromatin. Epigenetics Chromatin. 2011 Mar 18;4:5. doi: 10.1186/1756-8935-4-5. PMID: 21418567; PMCID: PMC3068931.
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O-GlcNAcylation and Inflammation: A Vast Territory to Explore.

Frontiers in endocrinology

Baudoin L, Issad T.
PMID: 25620956
Front Endocrinol (Lausanne). 2015 Jan 09;5:235. doi: 10.3389/fendo.2014.00235. eCollection 2014.

O-GlcNAcylation is a reversible post-translational modification that regulates the activities of cytosolic and nuclear proteins according to glucose availability. This modification appears to participate in several hyperglycemia-associated complications. An important feature of metabolic diseases such as diabetes and obesity...

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Baudoin L, Issad T. O-GlcNAcylation and Inflammation: A Vast Territory to Explore. Front Endocrinol (Lausanne). 2015;5:235doi: 10.3389/fendo.2014.00235.
Baudoin, L., & Issad, T. (2014). O-GlcNAcylation and Inflammation: A Vast Territory to Explore. Frontiers in endocrinology, 5235. https://doi.org/10.3389/fendo.2014.00235
Baudoin, Léa, and Issad, Tarik. "O-GlcNAcylation and Inflammation: A Vast Territory to Explore." Frontiers in endocrinology vol. 5 (2014): 235. doi: https://doi.org/10.3389/fendo.2014.00235
Baudoin L, Issad T. O-GlcNAcylation and Inflammation: A Vast Territory to Explore. Front Endocrinol (Lausanne). 2015 Jan 09;5:235. doi: 10.3389/fendo.2014.00235. eCollection 2014. PMID: 25620956; PMCID: PMC4288382.
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Chromatin Remodeling Protein SMAR1 Is a Critical Regulator of T Helper Cell Differentiation and Inflammatory Diseases.

Frontiers in immunology

Mirlekar B, Gautam D, Chattopadhyay S.
PMID: 28232831
Front Immunol. 2017 Feb 09;8:72. doi: 10.3389/fimmu.2017.00072. eCollection 2017.

T cell differentiation from naïve T cells to specialized effector subsets of mature cells is determined by the iterative action of transcription factors. At each stage of specific T cell lineage differentiation, transcription factor interacts not only with nuclear...

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Mirlekar B, Gautam D, Chattopadhyay S. Chromatin Remodeling Protein SMAR1 Is a Critical Regulator of T Helper Cell Differentiation and Inflammatory Diseases. Front Immunol. 2017;8:72doi: 10.3389/fimmu.2017.00072.
Mirlekar, B., Gautam, D., & Chattopadhyay, S. (2017). Chromatin Remodeling Protein SMAR1 Is a Critical Regulator of T Helper Cell Differentiation and Inflammatory Diseases. Frontiers in immunology, 872. https://doi.org/10.3389/fimmu.2017.00072
Mirlekar, Bhalchandra, et al. "Chromatin Remodeling Protein SMAR1 Is a Critical Regulator of T Helper Cell Differentiation and Inflammatory Diseases." Frontiers in immunology vol. 8 (2017): 72. doi: https://doi.org/10.3389/fimmu.2017.00072
Mirlekar B, Gautam D, Chattopadhyay S. Chromatin Remodeling Protein SMAR1 Is a Critical Regulator of T Helper Cell Differentiation and Inflammatory Diseases. Front Immunol. 2017 Feb 09;8:72. doi: 10.3389/fimmu.2017.00072. eCollection 2017. PMID: 28232831; PMCID: PMC5298956.
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The Emerging Role of the Cytoskeleton in Chromosome Dynamics.

Frontiers in genetics

Spichal M, Fabre E.
PMID: 28580009
Front Genet. 2017 May 19;8:60. doi: 10.3389/fgene.2017.00060. eCollection 2017.

Chromosomes underlie a dynamic organization that fulfills functional roles in processes like transcription, DNA repair, nuclear envelope stability, and cell division. Chromosome dynamics depend on chromosome structure and cannot freely diffuse. Furthermore, chromosomes interact closely with their surrounding nuclear...

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Spichal M, Fabre E. The Emerging Role of the Cytoskeleton in Chromosome Dynamics. Front Genet. 2017;8:60doi: 10.3389/fgene.2017.00060.
Spichal, M., & Fabre, E. (2017). The Emerging Role of the Cytoskeleton in Chromosome Dynamics. Frontiers in genetics, 860. https://doi.org/10.3389/fgene.2017.00060
Spichal, Maya, and Fabre, Emmanuelle. "The Emerging Role of the Cytoskeleton in Chromosome Dynamics." Frontiers in genetics vol. 8 (2017): 60. doi: https://doi.org/10.3389/fgene.2017.00060
Spichal M, Fabre E. The Emerging Role of the Cytoskeleton in Chromosome Dynamics. Front Genet. 2017 May 19;8:60. doi: 10.3389/fgene.2017.00060. eCollection 2017. PMID: 28580009; PMCID: PMC5437106.
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Sequential fractionation and isolation of subcellular proteins from tissue or cultured cells.

MethodsX

Baghirova S, Hughes BG, Hendzel MJ, Schulz R.
PMID: 26740924
MethodsX. 2015 Nov 07;2:440-5. doi: 10.1016/j.mex.2015.11.001. eCollection 2015.

Many types of studies require the localization of a protein to, or isolation of enriched protein from a specific cellular compartment. Many protocols in the literature and from commercially available kits claim to yield pure cellular fractions. However, in...

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Baghirova S, Hughes BG, Hendzel MJ, et al. Sequential fractionation and isolation of subcellular proteins from tissue or cultured cells. MethodsX. 2015;2:440-5doi: 10.1016/j.mex.2015.11.001.
Baghirova, S., Hughes, B. G., Hendzel, M. J., & Schulz, R. (2015). Sequential fractionation and isolation of subcellular proteins from tissue or cultured cells. MethodsX, 2440-5. https://doi.org/10.1016/j.mex.2015.11.001
Baghirova, Sabina, et al. "Sequential fractionation and isolation of subcellular proteins from tissue or cultured cells." MethodsX vol. 2 (2015): 440-5. doi: https://doi.org/10.1016/j.mex.2015.11.001
Baghirova S, Hughes BG, Hendzel MJ, Schulz R. Sequential fractionation and isolation of subcellular proteins from tissue or cultured cells. MethodsX. 2015 Nov 07;2:440-5. doi: 10.1016/j.mex.2015.11.001. eCollection 2015. PMID: 26740924; PMCID: PMC4678309.
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A variant of Runx2 that differs from the bone isoform in its splicing is expressed in spermatogenic cells.

PeerJ

Kanto S, Grynberg M, Kaneko Y, Fujita J, Satake M.
PMID: 27069802
PeerJ. 2016 Apr 04;4:e1862. doi: 10.7717/peerj.1862. eCollection 2016.

Background. Members of the Runx gene family encode transcription factors that bind to DNA in a sequence-specific manner. Among the three Runx proteins, Runx2 comprises 607 amino acid (aa) residues, is expressed in bone, and plays crucial roles in...

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Kanto S, Grynberg M, Kaneko Y, et al. A variant of Runx2 that differs from the bone isoform in its splicing is expressed in spermatogenic cells. PeerJ. 2016;4:e1862doi: 10.7717/peerj.1862.
Kanto, S., Grynberg, M., Kaneko, Y., Fujita, J., & Satake, M. (2016). A variant of Runx2 that differs from the bone isoform in its splicing is expressed in spermatogenic cells. PeerJ, 4e1862. https://doi.org/10.7717/peerj.1862
Kanto, Satoru, et al. "A variant of Runx2 that differs from the bone isoform in its splicing is expressed in spermatogenic cells." PeerJ vol. 4 (2016): e1862. doi: https://doi.org/10.7717/peerj.1862
Kanto S, Grynberg M, Kaneko Y, Fujita J, Satake M. A variant of Runx2 that differs from the bone isoform in its splicing is expressed in spermatogenic cells. PeerJ. 2016 Apr 04;4:e1862. doi: 10.7717/peerj.1862. eCollection 2016. PMID: 27069802; PMCID: PMC4824880.
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Immunolocalization of a nuclear protein bound to the sphere organelle during oogenesis and embryogenesis inPleurodeles waltl.

Roux's archives of developmental biology : the official organ of the EDBO

Boucher D, Loones MT, Pyne CK, Simon F, Abbadie C, Charlemagne J, Lacroix JC.
PMID: 28305890
Rouxs Arch Dev Biol. 1991 Aug;199(8):458-468. doi: 10.1007/BF01705782.

The distribution of a nuclear antigen ofPleurodeles waltl oocytes, recognized by the monoclonal antibody B24/1, has been studied during oogenesis and early embryonic development. In stage I oocytes the antigen was localized in the nucleoplasm and on two atypical...

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Boucher D, Loones MT, Pyne CK, et al. Immunolocalization of a nuclear protein bound to the sphere organelle during oogenesis and embryogenesis inPleurodeles waltl. Rouxs Arch Dev Biol. 1991;199(8):458-468doi: 10.1007/BF01705782.
Boucher, D., Loones, M. T., Pyne, C. K., Simon, F., Abbadie, C., Charlemagne, J., & Lacroix, J. C. (1991). Immunolocalization of a nuclear protein bound to the sphere organelle during oogenesis and embryogenesis inPleurodeles waltl. Roux's archives of developmental biology : the official organ of the EDBO, 199(8), 458-468. https://doi.org/10.1007/BF01705782
Boucher, Dominique, et al. "Immunolocalization of a nuclear protein bound to the sphere organelle during oogenesis and embryogenesis inPleurodeles waltl." Roux's archives of developmental biology : the official organ of the EDBO vol. 199,8 (1991): 458-468. doi: https://doi.org/10.1007/BF01705782
Boucher D, Loones MT, Pyne CK, Simon F, Abbadie C, Charlemagne J, Lacroix JC. Immunolocalization of a nuclear protein bound to the sphere organelle during oogenesis and embryogenesis inPleurodeles waltl. Rouxs Arch Dev Biol. 1991 Aug;199(8):458-468. doi: 10.1007/BF01705782. PMID: 28305890.
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An Intracellular Arrangement of Histoplasma capsulatum Yeast-Aggregates Generates Nuclear Damage to the Cultured Murine Alveolar Macrophages.

Frontiers in microbiology

Pitangui Nde S, Sardi Jde C, Voltan AR, Dos Santos CT, da Silva Jde F, da Silva RA, Souza FO, Soares CP, Rodríguez-Arellanes G, Taylor ML, Mendes-Giannini MJ, Fusco-Almeida AM.
PMID: 26793172
Front Microbiol. 2016 Jan 11;6:1526. doi: 10.3389/fmicb.2015.01526. eCollection 2015.

Histoplasma capsulatum is responsible for a human systemic mycosis that primarily affects lung tissue. Macrophages are the major effector cells in humans that respond to the fungus, and the development of respiratory disease depends on the ability of Histoplasma...

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Pitangui Nde S, Sardi Jde C, Voltan AR, et al. An Intracellular Arrangement of Histoplasma capsulatum Yeast-Aggregates Generates Nuclear Damage to the Cultured Murine Alveolar Macrophages. Front Microbiol. 2016;6:1526doi: 10.3389/fmicb.2015.01526.
Pitangui, N. d. e. . S., Sardi, J. d. e. . C., Voltan, A. R., Dos Santos, C. T., da Silva, J. d. e. . F., da Silva, R. A., Souza, F. O., Soares, C. P., Rodríguez-Arellanes, G., Taylor, M. L., Mendes-Giannini, M. J., & Fusco-Almeida, A. M. (2015). An Intracellular Arrangement of Histoplasma capsulatum Yeast-Aggregates Generates Nuclear Damage to the Cultured Murine Alveolar Macrophages. Frontiers in microbiology, 61526. https://doi.org/10.3389/fmicb.2015.01526
Pitangui, Nayla de Souza, et al. "An Intracellular Arrangement of Histoplasma capsulatum Yeast-Aggregates Generates Nuclear Damage to the Cultured Murine Alveolar Macrophages." Frontiers in microbiology vol. 6 (2015): 1526. doi: https://doi.org/10.3389/fmicb.2015.01526
Pitangui Nde S, Sardi Jde C, Voltan AR, Dos Santos CT, da Silva Jde F, da Silva RA, Souza FO, Soares CP, Rodríguez-Arellanes G, Taylor ML, Mendes-Giannini MJ, Fusco-Almeida AM. An Intracellular Arrangement of Histoplasma capsulatum Yeast-Aggregates Generates Nuclear Damage to the Cultured Murine Alveolar Macrophages. Front Microbiol. 2016 Jan 11;6:1526. doi: 10.3389/fmicb.2015.01526. eCollection 2015. PMID: 26793172; PMCID: PMC4707385.
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The Eye Specification Network in Drosophila.

Proceedings of the Indian National Science Academy. Part B, Biological sciences

Weasner BP, Anderson J, Kumar JP.
PMID: 25580038
Proc Indian Natl Sci Acad B Biol Sci. 2004;(5):517-530.

One of the most exciting revelations in retinal biology is the realization that the molecules and mechanisms that regulate eye development have been conserved in all seeing animals including such diverse organisms as the fruit fly, mouse and man....

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Weasner BP, Anderson J, Kumar JP. The Eye Specification Network in Drosophila. Proc Indian Natl Sci Acad B Biol Sci. 2004;(5):517-530
Weasner, B. P., Anderson, J., & Kumar, J. P. (2004). The Eye Specification Network in Drosophila. Proceedings of the Indian National Science Academy. Part B, Biological sciences, (5), 517-530.
Weasner, Brandon P, et al. "The Eye Specification Network in Drosophila." Proceedings of the Indian National Science Academy. Part B, Biological sciences vol. ,5 (2004): 517-530.
Weasner BP, Anderson J, Kumar JP. The Eye Specification Network in Drosophila. Proc Indian Natl Sci Acad B Biol Sci. 2004;(5):517-530. PMID: 25580038; PMCID: PMC4286332.
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Thyroid Hormone Stimulates Renin Gene Expression Through the Thyroid Hormone Response Element.

Hypertension (Dallas, Tex. : 1979)

Kobori H, Hayashi M, Saruta T.
PMID: 11208763
Hypertension. 2001 Jan;37(1):99-104. doi: 10.1161/01.hyp.37.1.99.

-We previously reported that thyroid hormone stimulates renin synthesis in vivo and in vitro. Here, we analyzed the 5'-flanking sequence of the human renin gene for promoter activity responsive to thyroid hormone using Calu-6 cells, which secrete renin endogenously...

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Kobori H, Hayashi M, Saruta T. Thyroid Hormone Stimulates Renin Gene Expression Through the Thyroid Hormone Response Element. Hypertension. 2001;37(1):99-104doi: 10.1161/01.hyp.37.1.99.
Kobori, H., Hayashi, M., & Saruta, T. (2001). Thyroid Hormone Stimulates Renin Gene Expression Through the Thyroid Hormone Response Element. Hypertension (Dallas, Tex. : 1979), 37(1), 99-104. https://doi.org/10.1161/01.hyp.37.1.99
Kobori, Hiroyuki, et al. "Thyroid Hormone Stimulates Renin Gene Expression Through the Thyroid Hormone Response Element." Hypertension (Dallas, Tex. : 1979) vol. 37,1 (2001): 99-104. doi: https://doi.org/10.1161/01.hyp.37.1.99
Kobori H, Hayashi M, Saruta T. Thyroid Hormone Stimulates Renin Gene Expression Through the Thyroid Hormone Response Element. Hypertension. 2001 Jan;37(1):99-104. doi: 10.1161/01.hyp.37.1.99. PMID: 11208763; PMCID: PMC2573046.
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Structure and Function of a Novel Silencer in 5' Flanking Distal Region of Human beta Globin Gene.

Sheng wu hua xue yu sheng wu wu li xue bao Acta biochimica et biophysica Sinica

Yang Y, Yang YY, Li HM, Zhu DE.
PMID: 12050787
Sheng Wu Hua Xue Yu Sheng Wu Wu Li Xue Bao (Shanghai). 2001;33(3):286-290.

A novel silencer fragment(310 bp) was recently discovered and identified to locate between -2 132 bp and -1 822 bp upstream from the cap site of beta-globin gene by gel retardation assay and luciferase reporter gene expression analysis. DNA...

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Yang Y, Yang YY, Li HM, et al. Structure and Function of a Novel Silencer in 5' Flanking Distal Region of Human beta Globin Gene. Sheng Wu Hua Xue Yu Sheng Wu Wu Li Xue Bao (Shanghai). 2001;33(3):286-290
Yang, Y., Yang, Y. Y., Li, H. M., & Zhu, D. E. (2001). Structure and Function of a Novel Silencer in 5' Flanking Distal Region of Human beta Globin Gene. Sheng wu hua xue yu sheng wu wu li xue bao Acta biochimica et biophysica Sinica, 33(3), 286-290.
Yang, Yu, et al. "Structure and Function of a Novel Silencer in 5' Flanking Distal Region of Human beta Globin Gene." Sheng wu hua xue yu sheng wu wu li xue bao Acta biochimica et biophysica Sinica vol. 33,3 (2001): 286-290.
Yang Y, Yang YY, Li HM, Zhu DE. Structure and Function of a Novel Silencer in 5' Flanking Distal Region of Human beta Globin Gene. Sheng Wu Hua Xue Yu Sheng Wu Wu Li Xue Bao (Shanghai). 2001;33(3):286-290. PMID: 12050787.
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Functional analysis of a nitrite reductase promoter from birch in transgenic tobacco.

Plant science : an international journal of experimental plant biology

Warning HO, Hachtel W.
PMID: 10814817
Plant Sci. 2000 Jun 29;155(2):141-151. doi: 10.1016/s0168-9452(00)00211-9.

Nitrate assimilation is a highly regulated process in higher plants, and the regulatory cues governing gene expression in this pathway include both external and internal factors. In birch (Betula pendula Roth) the expression of nitrate reductase (NR) and nitrite...

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Warning HO, Hachtel W. Functional analysis of a nitrite reductase promoter from birch in transgenic tobacco. Plant Sci. 2000;155(2):141-151doi: 10.1016/s0168-9452(00)00211-9.
Warning, H. O., & Hachtel, W. (2000). Functional analysis of a nitrite reductase promoter from birch in transgenic tobacco. Plant science : an international journal of experimental plant biology, 155(2), 141-151. https://doi.org/10.1016/s0168-9452(00)00211-9
Warning, and Hachtel. "Functional analysis of a nitrite reductase promoter from birch in transgenic tobacco." Plant science : an international journal of experimental plant biology vol. 155,2 (2000): 141-151. doi: https://doi.org/10.1016/s0168-9452(00)00211-9
Warning HO, Hachtel W. Functional analysis of a nitrite reductase promoter from birch in transgenic tobacco. Plant Sci. 2000 Jun 29;155(2):141-151. doi: 10.1016/s0168-9452(00)00211-9. PMID: 10814817.
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Showing 1 to 12 of 305 entries