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Showing 1 to 12 of 195 entries
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MiRTargetLink--miRNAs, Genes and Interaction Networks.

International journal of molecular sciences

Hamberg M, Backes C, Fehlmann T, Hart M, Meder B, Meese E, Keller A.
PMID: 27089332
Int J Mol Sci. 2016 Apr 14;17(4):564. doi: 10.3390/ijms17040564.

Information on miRNA targeting genes is growing rapidly. For high-throughput experiments, but also for targeted analyses of few genes or miRNAs, easy analysis with concise representation of results facilitates the work of life scientists. We developed miRTargetLink, a tool...

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Hamberg M, Backes C, Fehlmann T, et al. MiRTargetLink--miRNAs, Genes and Interaction Networks. Int J Mol Sci. 2016;17(4):564doi: 10.3390/ijms17040564.
Hamberg, M., Backes, C., Fehlmann, T., Hart, M., Meder, B., Meese, E., & Keller, A. (2016). MiRTargetLink--miRNAs, Genes and Interaction Networks. International journal of molecular sciences, 17(4), 564. https://doi.org/10.3390/ijms17040564
Hamberg, Maarten, et al. "MiRTargetLink--miRNAs, Genes and Interaction Networks." International journal of molecular sciences vol. 17,4 (2016): 564. doi: https://doi.org/10.3390/ijms17040564
Hamberg M, Backes C, Fehlmann T, Hart M, Meder B, Meese E, Keller A. MiRTargetLink--miRNAs, Genes and Interaction Networks. Int J Mol Sci. 2016 Apr 14;17(4):564. doi: 10.3390/ijms17040564. PMID: 27089332; PMCID: PMC4849020.
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miRQuest: integration of tools on a Web server for microRNA research.

Genetics and molecular research : GMR

Aguiar RR, Ambrosio LA, Sepúlveda-Hermosilla G, Maracaja-Coutinho V, Paschoal AR.
PMID: 27050998
Genet Mol Res. 2016 Mar 28;15(1). doi: 10.4238/gmr.15016861.

This report describes the miRQuest - a novel middleware available in a Web server that allows the end user to do the miRNA research in a user-friendly way. It is known that there are many prediction tools for microRNA...

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Aguiar RR, Ambrosio LA, Sepúlveda-Hermosilla G, et al. miRQuest: integration of tools on a Web server for microRNA research. Genet Mol Res. 2016;15(1)doi: 10.4238/gmr.15016861.
Aguiar, R. R., Ambrosio, L. A., Sepúlveda-Hermosilla, G., Maracaja-Coutinho, V., & Paschoal, A. R. (2016). miRQuest: integration of tools on a Web server for microRNA research. Genetics and molecular research : GMR, 15(1), . https://doi.org/10.4238/gmr.15016861
Aguiar, R R, et al. "miRQuest: integration of tools on a Web server for microRNA research." Genetics and molecular research : GMR vol. 15,1 (2016). doi: https://doi.org/10.4238/gmr.15016861
Aguiar RR, Ambrosio LA, Sepúlveda-Hermosilla G, Maracaja-Coutinho V, Paschoal AR. miRQuest: integration of tools on a Web server for microRNA research. Genet Mol Res. 2016 Mar 28;15(1). doi: 10.4238/gmr.15016861. PMID: 27050998.
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MicroRNAs and triple negative breast cancer.

International journal of molecular sciences

D'Ippolito E, Iorio MV.
PMID: 24284394
Int J Mol Sci. 2013 Nov 11;14(11):22202-20. doi: 10.3390/ijms141122202.

Triple Negative Breast Cancer (TNBC) is a very aggressive tumor subtype, which still lacks specific markers for an effective targeted therapy. Despite the common feature of negativity for the three most relevant receptors (ER, PgR and HER2), TNBC is...

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D'Ippolito E, Iorio MV. MicroRNAs and triple negative breast cancer. Int J Mol Sci. 2013;14(11):22202-20doi: 10.3390/ijms141122202.
D'Ippolito, E., & Iorio, M. V. (2013). MicroRNAs and triple negative breast cancer. International journal of molecular sciences, 14(11), 22202-20. https://doi.org/10.3390/ijms141122202
D'Ippolito, Elvira, and Iorio, Marilena V. "MicroRNAs and triple negative breast cancer." International journal of molecular sciences vol. 14,11 (2013): 22202-20. doi: https://doi.org/10.3390/ijms141122202
D'Ippolito E, Iorio MV. MicroRNAs and triple negative breast cancer. Int J Mol Sci. 2013 Nov 11;14(11):22202-20. doi: 10.3390/ijms141122202. PMID: 24284394; PMCID: PMC3856060.
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The co-inertia approach in identification of specific microRNA in early and advanced atherosclerosis plaque.

Medical hypotheses

Jovanović I, Zivković M, Jovanović J, Djurić T, Stanković A.
PMID: 24815336
Med Hypotheses. 2014 Jul;83(1):11-5. doi: 10.1016/j.mehy.2014.04.019. Epub 2014 Apr 23.

MicroRNAs (miRs) are short, non-coding RNAs that regulate gene expression by absolute or partial binding to mRNA, which results in transcript degradation and translation blocking. Atherosclerosis, as a complex and progressive disease, represents one of the main causes of...

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Jovanović I, Zivković M, Jovanović J, et al. The co-inertia approach in identification of specific microRNA in early and advanced atherosclerosis plaque. Med Hypotheses. 2014;83(1):11-5doi: 10.1016/j.mehy.2014.04.019.
Jovanović, I., Zivković, M., Jovanović, J., Djurić, T., & Stanković, A. (2014). The co-inertia approach in identification of specific microRNA in early and advanced atherosclerosis plaque. Medical hypotheses, 83(1), 11-5. https://doi.org/10.1016/j.mehy.2014.04.019
Jovanović, Ivan, et al. "The co-inertia approach in identification of specific microRNA in early and advanced atherosclerosis plaque." Medical hypotheses vol. 83,1 (2014): 11-5. doi: https://doi.org/10.1016/j.mehy.2014.04.019
Jovanović I, Zivković M, Jovanović J, Djurić T, Stanković A. The co-inertia approach in identification of specific microRNA in early and advanced atherosclerosis plaque. Med Hypotheses. 2014 Jul;83(1):11-5. doi: 10.1016/j.mehy.2014.04.019. Epub 2014 Apr 23. PMID: 24815336.
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Computational and bioinformatics methods for microRNA gene prediction.

Methods in molecular biology (Clifton, N.J.)

Allmer J.
PMID: 24272436
Methods Mol Biol. 2014;1107:157-75. doi: 10.1007/978-1-62703-748-8_9.

MicroRNAs (miRNAs) have attracted ever-increasing interest in recent years. Since experimental approaches for determining miRNAs are nontrivial in their application, computational methods for the prediction of miRNAs have gained popularity. Such methods can be grouped into two broad categories...

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Allmer J. Computational and bioinformatics methods for microRNA gene prediction. Methods Mol Biol. 2014;1107:157-75doi: 10.1007/978-1-62703-748-8_9.
Allmer, J. (2014). Computational and bioinformatics methods for microRNA gene prediction. Methods in molecular biology (Clifton, N.J.), 1107157-75. https://doi.org/10.1007/978-1-62703-748-8_9
Allmer, Jens. "Computational and bioinformatics methods for microRNA gene prediction." Methods in molecular biology (Clifton, N.J.) vol. 1107 (2014): 157-75. doi: https://doi.org/10.1007/978-1-62703-748-8_9
Allmer J. Computational and bioinformatics methods for microRNA gene prediction. Methods Mol Biol. 2014;1107:157-75. doi: 10.1007/978-1-62703-748-8_9. PMID: 24272436.
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A high-throughput microRNA expression profiling system.

Methods in molecular biology (Clifton, N.J.)

Guo Y, Mastriano S, Lu J.
PMID: 25030917
Methods Mol Biol. 2014;1176:33-44. doi: 10.1007/978-1-4939-0992-6_4.

As small noncoding RNAs, microRNAs (miRNAs) regulate diverse biological functions, including physiological and pathological processes. The expression and deregulation of miRNA levels contain rich information with diagnostic and prognostic relevance and can reflect pharmacological responses. The increasing interest in...

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Guo Y, Mastriano S, Lu J. A high-throughput microRNA expression profiling system. Methods Mol Biol. 2014;1176:33-44doi: 10.1007/978-1-4939-0992-6_4.
Guo, Y., Mastriano, S., & Lu, J. (2014). A high-throughput microRNA expression profiling system. Methods in molecular biology (Clifton, N.J.), 117633-44. https://doi.org/10.1007/978-1-4939-0992-6_4
Guo, Yanwen, et al. "A high-throughput microRNA expression profiling system." Methods in molecular biology (Clifton, N.J.) vol. 1176 (2014): 33-44. doi: https://doi.org/10.1007/978-1-4939-0992-6_4
Guo Y, Mastriano S, Lu J. A high-throughput microRNA expression profiling system. Methods Mol Biol. 2014;1176:33-44. doi: 10.1007/978-1-4939-0992-6_4. PMID: 25030917.
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A miRNA-driven inference model to construct potential drug-disease associations for drug repositioning.

BioMed research international

Chen H, Zhang Z.
PMID: 25789319
Biomed Res Int. 2015;2015:406463. doi: 10.1155/2015/406463. Epub 2015 Feb 19.

Increasing evidence discovered that the inappropriate expression of microRNAs (miRNAs) will lead to many kinds of complex diseases and drugs can regulate the expression level of miRNAs. Therefore human diseases may be treated by targeting some specific miRNAs with...

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Chen H, Zhang Z. A miRNA-driven inference model to construct potential drug-disease associations for drug repositioning. Biomed Res Int. 2015;2015:406463doi: 10.1155/2015/406463.
Chen, H., & Zhang, Z. (2015). A miRNA-driven inference model to construct potential drug-disease associations for drug repositioning. BioMed research international, 2015406463. https://doi.org/10.1155/2015/406463
Chen, Hailin, and Zhang, Zuping. "A miRNA-driven inference model to construct potential drug-disease associations for drug repositioning." BioMed research international vol. 2015 (2015): 406463. doi: https://doi.org/10.1155/2015/406463
Chen H, Zhang Z. A miRNA-driven inference model to construct potential drug-disease associations for drug repositioning. Biomed Res Int. 2015;2015:406463. doi: 10.1155/2015/406463. Epub 2015 Feb 19. PMID: 25789319; PMCID: PMC4350970.
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OMIT: a domain-specific knowledge base for microRNA target prediction.

Pharmaceutical research

Huang J, Townsend C, Dou D, Liu H, Tan M.
PMID: 21879385
Pharm Res. 2011 Dec;28(12):3101-4. doi: 10.1007/s11095-011-0573-8. Epub 2011 Aug 31.

Identification and characterization of the important roles microRNAs (miRNAs) perform in human cancer is an increasingly active research area. Unfortunately, prediction of miRNA target genes remains a challenging task to cancer researchers. Current processes are time-consuming, error-prone, and subject...

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Huang J, Townsend C, Dou D, et al. OMIT: a domain-specific knowledge base for microRNA target prediction. Pharm Res. 2011;28(12):3101-4doi: 10.1007/s11095-011-0573-8.
Huang, J., Townsend, C., Dou, D., Liu, H., & Tan, M. (2011). OMIT: a domain-specific knowledge base for microRNA target prediction. Pharmaceutical research, 28(12), 3101-4. https://doi.org/10.1007/s11095-011-0573-8
Huang, Jingshan, et al. "OMIT: a domain-specific knowledge base for microRNA target prediction." Pharmaceutical research vol. 28,12 (2011): 3101-4. doi: https://doi.org/10.1007/s11095-011-0573-8
Huang J, Townsend C, Dou D, Liu H, Tan M. OMIT: a domain-specific knowledge base for microRNA target prediction. Pharm Res. 2011 Dec;28(12):3101-4. doi: 10.1007/s11095-011-0573-8. Epub 2011 Aug 31. PMID: 21879385.
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MicroRNA expression profiling in cancer from a bioinformatics prospective.

Expert review of molecular diagnostics

Gusev Y, Brackett DJ.
PMID: 18020908
Expert Rev Mol Diagn. 2007 Nov;7(6):787-92. doi: 10.1586/14737159.7.6.787.

A new type of noncoding short single-stranded RNA molecules, microRNA (miRNA), has recently emerged as one of the most important new classes of cellular regulators. Recent advances in miRNA research have provided evidence that aberrant expression of specific miRNAs...

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Gusev Y, Brackett DJ. MicroRNA expression profiling in cancer from a bioinformatics prospective. Expert Rev Mol Diagn. 2007;7(6):787-92doi: 10.1586/14737159.7.6.787.
Gusev, Y., & Brackett, D. J. (2007). MicroRNA expression profiling in cancer from a bioinformatics prospective. Expert review of molecular diagnostics, 7(6), 787-92. https://doi.org/10.1586/14737159.7.6.787
Gusev, Yuriy, and Brackett, Daniel J. "MicroRNA expression profiling in cancer from a bioinformatics prospective." Expert review of molecular diagnostics vol. 7,6 (2007): 787-92. doi: https://doi.org/10.1586/14737159.7.6.787
Gusev Y, Brackett DJ. MicroRNA expression profiling in cancer from a bioinformatics prospective. Expert Rev Mol Diagn. 2007 Nov;7(6):787-92. doi: 10.1586/14737159.7.6.787. PMID: 18020908.
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Potential clinical insights into microRNAs and their target genes in esophageal carcinoma.

Biomarkers : biochemical indicators of exposure, response, and susceptibility to chemicals

Li SQ, Wang HM, Cao XF.
PMID: 21870994
Biomarkers. 2011 Dec;16(8):629-36. doi: 10.3109/1354750X.2011.608132. Epub 2011 Aug 29.

Esophageal carcinoma (EC) are characterized by dysregulation of microRNAs, which play an important roles as a posttranscriptional regulators in protein synthesis, and are involved in cellular processes, such as proliferation, apoptosis, and differentiation. Recently, altered miRNAs expression has been...

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Li SQ, Wang HM, Cao XF. Potential clinical insights into microRNAs and their target genes in esophageal carcinoma. Biomarkers. 2011;16(8):629-36doi: 10.3109/1354750X.2011.608132.
Li, S. Q., Wang, H. M., & Cao, X. F. (2011). Potential clinical insights into microRNAs and their target genes in esophageal carcinoma. Biomarkers : biochemical indicators of exposure, response, and susceptibility to chemicals, 16(8), 629-36. https://doi.org/10.3109/1354750X.2011.608132
Li, Su Q, et al. "Potential clinical insights into microRNAs and their target genes in esophageal carcinoma." Biomarkers : biochemical indicators of exposure, response, and susceptibility to chemicals vol. 16,8 (2011): 629-36. doi: https://doi.org/10.3109/1354750X.2011.608132
Li SQ, Wang HM, Cao XF. Potential clinical insights into microRNAs and their target genes in esophageal carcinoma. Biomarkers. 2011 Dec;16(8):629-36. doi: 10.3109/1354750X.2011.608132. Epub 2011 Aug 29. PMID: 21870994.
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MicroRNA changes in advanced radiotherapy techniques and its effect to secondary cancers.

Medical hypotheses

Sert F.
PMID: 22658362
Med Hypotheses. 2012 Sep;79(3):421-2. doi: 10.1016/j.mehy.2012.05.026. Epub 2012 Jun 01.

MicroRNAs (miRNAs) are a kind of RNA, produced copies of endogenous hairpin-shaped, are 21-25 nucleotide length, small, and single chain. Recent studies have revealed that hundreds of miRNAs are found in the human genome and are responsible for diverse...

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Sert F. MicroRNA changes in advanced radiotherapy techniques and its effect to secondary cancers. Med Hypotheses. 2012;79(3):421-2doi: 10.1016/j.mehy.2012.05.026.
Sert, F. (2012). MicroRNA changes in advanced radiotherapy techniques and its effect to secondary cancers. Medical hypotheses, 79(3), 421-2. https://doi.org/10.1016/j.mehy.2012.05.026
Sert, Fatma. "MicroRNA changes in advanced radiotherapy techniques and its effect to secondary cancers." Medical hypotheses vol. 79,3 (2012): 421-2. doi: https://doi.org/10.1016/j.mehy.2012.05.026
Sert F. MicroRNA changes in advanced radiotherapy techniques and its effect to secondary cancers. Med Hypotheses. 2012 Sep;79(3):421-2. doi: 10.1016/j.mehy.2012.05.026. Epub 2012 Jun 01. PMID: 22658362.
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A home-brew real-time PCR assay for reliable detection and quantification of mature miR-122.

Applied immunohistochemistry & molecular morphology : AIMM

Naderi M, Abdul Tehrani H, Soleimani M, Shabani I, Hashemi SM.
PMID: 25075470
Appl Immunohistochem Mol Morphol. 2015 Sep;23(8):601-6. doi: 10.1097/PAI.0000000000000125.

miR-122 is a liver-specific miRNA that has significant gene expression alterations in response to specific pathophysiological circumstances of liver such as drug-induced liver injury, hepatocellular carcinoma, and hepatitis B and C virus infections. Therefore, accurate and precise quantification of...

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Naderi M, Abdul Tehrani H, Soleimani M, et al. A home-brew real-time PCR assay for reliable detection and quantification of mature miR-122. Appl Immunohistochem Mol Morphol. 2015;23(8):601-6doi: 10.1097/PAI.0000000000000125.
Naderi, M., Abdul Tehrani, H., Soleimani, M., Shabani, I., & Hashemi, S. M. (2015). A home-brew real-time PCR assay for reliable detection and quantification of mature miR-122. Applied immunohistochemistry & molecular morphology : AIMM, 23(8), 601-6. https://doi.org/10.1097/PAI.0000000000000125
Naderi, Mahmood, et al. "A home-brew real-time PCR assay for reliable detection and quantification of mature miR-122." Applied immunohistochemistry & molecular morphology : AIMM vol. 23,8 (2015): 601-6. doi: https://doi.org/10.1097/PAI.0000000000000125
Naderi M, Abdul Tehrani H, Soleimani M, Shabani I, Hashemi SM. A home-brew real-time PCR assay for reliable detection and quantification of mature miR-122. Appl Immunohistochem Mol Morphol. 2015 Sep;23(8):601-6. doi: 10.1097/PAI.0000000000000125. PMID: 25075470.
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Showing 1 to 12 of 195 entries