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Bioinformatics. 2017 Jul 15;33(14):2232-2234. doi: 10.1093/bioinformatics/btx139.

Estimating gene regulatory networks with pandaR.

Bioinformatics (Oxford, England)

Daniel Schlauch, Joseph N Paulson, Albert Young, Kimberly Glass, John Quackenbush

Affiliations

  1. Department of Computational Biology and Biostatistics, Dana-Farber Cancer Institute, Brigham and Women's Hospital, Boston, MA, USA.
  2. Department of Biostatistics, Harvard T.H. Chan School of Public Health, Brigham and Women's Hospital, Boston, MA, USA.
  3. Channing Division of Network Medicine, Brigham and Women's Hospital, Boston, MA, USA.

PMID: 28334344 PMCID: PMC5870629 DOI: 10.1093/bioinformatics/btx139

Abstract

CONTACT: [email protected] or [email protected].

AVAILABILITY AND IMPLEMENTATION: PandaR is provided as a Bioconductor R Package and is available at bioconductor.org/packages/pandaR.

© The Author(s) 2017. Published by Oxford University Press.

References

  1. PLoS One. 2013 May 31;8(5):e64832 - PubMed
  2. BMC Syst Biol. 2014 Nov 28;8:118 - PubMed
  3. Genome Med. 2015 Feb 14;7(1):12 - PubMed
  4. Genomics. 2016 Oct;108(3-4):126-133 - PubMed
  5. Bioinformatics. 2010 Aug 1;26(15):1879-86 - PubMed
  6. BMC Bioinformatics. 2015 Apr 11;16:115 - PubMed

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