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Ning C, Ma T, Hu S, et al. Long Non-coding RNA and mRNA Profile of Liver Tissue During Four Developmental Stages in the Chicken. Front Genet. 2020;11:574doi: 10.3389/fgene.2020.00574.
Ning, C., Ma, T., Hu, S., Xu, Z., Zhang, P., Zhao, X., Wang, Y., Yin, H., Hu, Y., Fan, X., Zeng, B., Yang, M., Yang, D., Ni, Q., Li, Y., Zhang, M., Xu, H., Yao, Y., Zhu, Q., & Li, D. (2020). Long Non-coding RNA and mRNA Profile of Liver Tissue During Four Developmental Stages in the Chicken. Frontiers in genetics, 11574. https://doi.org/10.3389/fgene.2020.00574
Ning, Chunyou, et al. "Long Non-coding RNA and mRNA Profile of Liver Tissue During Four Developmental Stages in the Chicken." Frontiers in genetics vol. 11 (2020): 574. doi: https://doi.org/10.3389/fgene.2020.00574
Ning C, Ma T, Hu S, Xu Z, Zhang P, Zhao X, Wang Y, Yin H, Hu Y, Fan X, Zeng B, Yang M, Yang D, Ni Q, Li Y, Zhang M, Xu H, Yao Y, Zhu Q, Li D. Long Non-coding RNA and mRNA Profile of Liver Tissue During Four Developmental Stages in the Chicken. Front Genet. 2020 Jun 16;11:574. doi: 10.3389/fgene.2020.00574. eCollection 2020. PMID: 32612636; PMCID: PMC7309962.
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Front Genet. 2020 Jun 16;11:574. doi: 10.3389/fgene.2020.00574. eCollection 2020.

Long Non-coding RNA and mRNA Profile of Liver Tissue During Four Developmental Stages in the Chicken.

Frontiers in genetics

Chunyou Ning, Tianyuan Ma, Silu Hu, Zhongxian Xu, Pu Zhang, Xiaoling Zhao, Yan Wang, Huadong Yin, Yaodong Hu, Xiaolan Fan, Bo Zeng, Mingyao Yang, Deying Yang, Qingyong Ni, Yan Li, Mingwang Zhang, Huailiang Xu, Yongfang Yao, Qing Zhu, Diyan Li

Affiliations

  1. Farm Animal Genetic Resources Exploration and Innovation Key Laboratory of Sichuan Province, College of Animal Science and Technology, Sichuan Agricultural University, Chengdu, China.
  2. College of Life Science, Sichuan Agricultural University, Ya'an, China.

PMID: 32612636 PMCID: PMC7309962 DOI: 10.3389/fgene.2020.00574

Abstract

The liver is the major organ of lipid biosynthesis in the chicken. In laying hens, the liver synthesizes most of the yolk precursors and transports them to developing follicles to produce eggs. However, a systematic investigation of the long non-coding RNA (lncRNA) and mRNA transcriptome in liver across developmental stages is needed. Here, we constructed 12 RNA libraries from liver tissue during four developmental stages: juvenile (day 60), sexual maturity (day 133), peak laying (day 220), and broodiness (day 400). A total of 16,930 putative lncRNAs and 18,260 mRNAs were identified. More than half (53.70%) of the lncRNAs were intergenic lncRNAs. The temporal expression pattern showed that lncRNAs were more restricted than mRNAs. We identified numerous differentially expressed lncRNAs and mRNAs by pairwise comparison between the four developmental stages and found that

Copyright © 2020 Ning, Ma, Hu, Xu, Zhang, Zhao, Wang, Yin, Hu, Fan, Zeng, Yang, Yang, Ni, Li, Zhang, Xu, Yao, Zhu and Li.

Keywords: chicken; development; liver; long non-coding RNA; mRNA

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