Display options
Share it on

Hum Mol Genet. 2021 Nov 01;30(22):2190-2204. doi: 10.1093/hmg/ddab166.

Genome-wide association study of body fat distribution traits in Hispanics/Latinos from the HCHS/SOL.

Human molecular genetics

Anne E Justice, Kristin Young, Stephanie M Gogarten, Tamar Sofer, Misa Graff, Shelly Ann M Love, Yujie Wang, Yann C Klimentidis, Miguel Cruz, Xiuqing Guo, Fernando Hartwig, Lauren Petty, Jie Yao, Matthew A Allison, Jennifer E Below, Thomas A Buchanan, Yii-Der Ida Chen, Mark O Goodarzi, Craig Hanis, Heather M Highland, Willa A Hsueh, Eli Ipp, Esteban Parra, Walter Palmas, Leslie J Raffel, Jerome I Rotter, Jingyi Tan, Kent D Taylor, Adan Valladares, Anny H Xiang, Lisa Sánchez-Johnsen, Carmen R Isasi, Kari E North

Affiliations

  1. Department of Population Health Sciences, Geisinger Health System, Danville, PA 17822, USA.
  2. Department of Epidemiology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27516, USA.
  3. Department of Biostatistics, University of Washington, Seattle, WA 98195, USA.
  4. Department of Epidemiology and Biostatistics, University of Arizona, Tucson, AZ 85724, USA.
  5. Unidad de Investigacion Medica en Bioquimica, Hospital de Especialidades, Centro Medico Nacional Siglo XXI (CMNSXX1)-IMSS, Mexico City 06720, Mexico.
  6. The Institute for Translational Genomics and Population Sciences, Department of Pediatrics, The Lundquist Institute for Biomedical Innovation at Harbor-UCLA Medical Center, Torrance, CA 90502, USA.
  7. Center for Epidemiological Research, Universidade Federal de Pelotas, Pelotas 96020, Brazil.
  8. Division of Genetic Medicine, Department of Medicine, Vanderbilt Genetics Institute, Vanderbilt University Medical Center, Nashville, TN 37232, USA.
  9. Division of Preventive Medicine, Department of Family Medicine, University of California San Diego, La Jolla, CA 92093, USA.
  10. Department of Medicine, Keck School of Medicine and Diabetes and Obesity Research Institute, University of Southern California, Los Angeles, CA 90033, USA.
  11. Division of Endocrinology, Diabetes, and Metabolism, Department of Medicine, Cedars-Sinai Medical Center, Los Angeles, CA 90048, USA.
  12. Human Genetics Center, Department of Epidemiology, Human Genetics and Environmental Sciences, School of Public Health, The University of Texas Health Science Center at Houston, Houston, TX 77030, USA.
  13. Division of Endocrinology, Diabetes and Metabolism, Department of Medicine, Wexner Medical Center, The Ohio State University, Columbus, OH 43210, USA.
  14. Department of Medicine, Endocrinology, Diabetes & Metabolism, The Lundquist Institute for Biomedical Innovation at Harbor-UCLA Medical Center, Torrance, CA 90502, USA.
  15. Department of Anthropology, University of Toronto at Mississauga, Mississauga, ON L5L 1C6, Canada.
  16. Department of Medicine, Columbia University Medical Center, New York, NY 10032, USA.
  17. Department of PediatrIcs, Division of Genetic and Genomic Medicine, University of California, Irvine, CA 92868, USA.
  18. Department of Research and Evaluation, Kaiser Permanente Southern California, Pasadena, CA 91101, USA.
  19. Department of Family Medicine, Rush University Medical Center, Chicago, IL 60612, USA.
  20. Department of Epidemiology & Population Health, Albert Einstein College of Medicine, Bronx, NY 10467, USA.
  21. Department of Pediatrics, Albert Einstein College of Medicine, Bronx, NY 10467, USA.

PMID: 34165540 PMCID: PMC8561424 DOI: 10.1093/hmg/ddab166

Abstract

Central obesity is a leading health concern with a great burden carried by ethnic minority populations, especially Hispanics/Latinos. Genetic factors contribute to the obesity burden overall and to inter-population differences. We aimed to identify the loci associated with central adiposity measured as waist-to-hip ratio (WHR), waist circumference (WC) and hip circumference (HIP) adjusted for body mass index (adjBMI) by using the Hispanic Community Health Study/Study of Latinos (HCHS/SOL); determine if differences in associations differ by background group within HCHS/SOL and determine whether previously reported associations generalize to HCHS/SOL. Our analyses included 7472 women and 5200 men of mainland (Mexican, Central and South American) and Caribbean (Puerto Rican, Cuban and Dominican) background residing in the USA. We performed genome-wide association analyses stratified and combined across sexes using linear mixed-model regression. We identified 16 variants for waist-to-hip ratio adjusted for body mass index (WHRadjBMI), 22 for waist circumference adjusted for body mass index (WCadjBMI) and 28 for hip circumference adjusted for body mass index (HIPadjBMI), which reached suggestive significance (P < 1 × 10-6). Many loci exhibited differences in strength of associations by ethnic background and sex. We brought a total of 66 variants forward for validation in cohorts (N = 34 161) with participants of Hispanic/Latino, African and European descent. We confirmed four novel loci (P < 0.05 and consistent direction of effect, and P < 5 × 10-8 after meta-analysis), including two for WHRadjBMI (rs13301996, rs79478137); one for WCadjBMI (rs3168072) and one for HIPadjBMI (rs28692724). Also, we generalized previously reported associations to HCHS/SOL, (8 for WHRadjBMI, 10 for WCadjBMI and 12 for HIPadjBMI). Our study highlights the importance of large-scale genomic studies in ancestrally diverse Hispanic/Latino populations for identifying and characterizing central obesity susceptibility that may be ancestry-specific.

© The Author(s) 2021. Published by Oxford University Press.

References

  1. Eur J Clin Nutr. 2010 Jan;64(1):16-22 - PubMed
  2. Nature. 2015 Dec 24;528(7583):499-503 - PubMed
  3. Nat Commun. 2017 Apr 26;8:14977 - PubMed
  4. Ann Epidemiol. 2010 Aug;20(8):629-41 - PubMed
  5. Am J Hum Genet. 2013 Aug 8;93(2):278-88 - PubMed
  6. Int J Obes (Lond). 2007 Aug;31(8):1232-9 - PubMed
  7. Proc Natl Acad Sci U S A. 1998 Mar 31;95(7):3873-8 - PubMed
  8. PLoS Genet. 2017 Apr 27;13(4):e1006528 - PubMed
  9. Circulation. 2015 Aug 4;132(5):457-72 - PubMed
  10. G3 (Bethesda). 2011 Nov;1(6):457-70 - PubMed
  11. Genet Epidemiol. 2015 May;39(4):276-93 - PubMed
  12. Science. 2015 Sep 18;349(6254):1343-7 - PubMed
  13. Nature. 2015 Feb 12;518(7538):187-196 - PubMed
  14. Am J Hum Genet. 2017 Jun 1;100(6):865-884 - PubMed
  15. Am J Med Genet A. 2012 Jun;158A(6):1388-94 - PubMed
  16. Nature. 2012 Nov 1;491(7422):56-65 - PubMed
  17. Diabetes Care. 1994 Sep;17(9):1067-74 - PubMed
  18. Am J Hum Genet. 2007 Nov;81(5):1084-97 - PubMed
  19. Am J Clin Nutr. 2005 Mar;81(3):555-63 - PubMed
  20. Ann Epidemiol. 2010 Aug;20(8):642-9 - PubMed
  21. Lancet. 2011 Feb 12;377(9765):557-67 - PubMed
  22. Nat Rev Genet. 2005 Apr;6(4):333-40 - PubMed
  23. J Lipid Res. 2016 Jan;57(1):56-65 - PubMed
  24. Nat Genet. 2010 Nov;42(11):949-60 - PubMed
  25. Nucleic Acids Res. 2016 Jan 4;44(D1):D877-81 - PubMed
  26. N Engl J Med. 1986 Jul 10;315(2):96-100 - PubMed
  27. Genet Epidemiol. 2017 Apr;41(3):251-258 - PubMed
  28. Front Endocrinol (Lausanne). 2012 Feb 28;3:29 - PubMed
  29. Am J Epidemiol. 1997 Apr 1;145(7):614-9 - PubMed
  30. Nature. 2010 Sep 2;467(7311):52-8 - PubMed
  31. Int J Obes (Lond). 2011 Jan;35(1):121-7 - PubMed
  32. PLoS Genet. 2017 Apr 21;13(4):e1006719 - PubMed
  33. Am J Clin Nutr. 2000 Jun;71(6):1392-402 - PubMed
  34. Nat Genet. 2012 Feb 19;44(3):307-11 - PubMed
  35. PLoS One. 2012;7(9):e44926 - PubMed
  36. Am J Hum Biol. 2014 May-Jun;26(3):347-60 - PubMed
  37. PLoS Genet. 2015 Oct 01;11(10):e1005378 - PubMed
  38. Nat Rev Endocrinol. 2018 Apr;14(4):229-249 - PubMed
  39. PLoS Genet. 2012;8(5):e1002705 - PubMed
  40. Bioinformatics. 2019 Nov 1;35(22):4851-4853 - PubMed
  41. Alzheimers Dement. 2018 Jun;14(6):787-796 - PubMed
  42. Indian J Med Res. 2007 Mar;125(3):251-8 - PubMed
  43. JAMA. 2006 Apr 5;295(13):1549-55 - PubMed
  44. PLoS Genet. 2013 Jun;9(6):e1003500 - PubMed
  45. Hum Mol Genet. 2002 May 15;11(11):1317-25 - PubMed
  46. Dev Cell. 2010 Jun 15;18(6):913-26 - PubMed
  47. Nat Genet. 2013 May;45(5):501-12 - PubMed
  48. Nat Genet. 2019 Apr;51(4):584-591 - PubMed
  49. Nat Genet. 2009 May;41(5):527-34 - PubMed
  50. Arch Intern Med. 2000 Jul 24;160(14):2117-28 - PubMed
  51. Genome Res. 2012 Sep;22(9):1790-7 - PubMed
  52. Nat Genet. 2013 Jun;45(6):580-5 - PubMed
  53. Int J Obes (Lond). 2012 Feb;36(2):304-13 - PubMed
  54. Alzheimer Dis Assoc Disord. 2011 Jul-Sep;25(3):276-82 - PubMed
  55. Sci Rep. 2016 Jan 20;6:17958 - PubMed
  56. Am J Hum Genet. 2016 Jan 7;98(1):165-84 - PubMed
  57. Mol Genet Genomics. 2017 Apr;292(2):365-383 - PubMed
  58. Nature. 2010 Aug 5;466(7307):707-13 - PubMed
  59. Bioinformatics. 2010 Sep 1;26(17):2190-1 - PubMed
  60. Genomics. 2006 Jul;88(1):12-7 - PubMed
  61. Nat Genet. 2013 Jun;45(6):690-6 - PubMed
  62. Genome Res. 2002 Jun;12(6):996-1006 - PubMed
  63. JAMA. 2012 Feb 1;307(5):491-7 - PubMed
  64. Bioinformatics. 2016 Oct 15;32(20):3207-3209 - PubMed
  65. BMC Genet. 2011 May 20;12:50 - PubMed
  66. Bioinformatics. 2015 Jan 15;31(2):259-61 - PubMed
  67. Nature. 2010 Oct 14;467(7317):832-8 - PubMed
  68. Nat Genet. 2019 Mar;51(3):452-469 - PubMed
  69. Obes Res. 2003 Jan;11(1):104-11 - PubMed
  70. Obes Facts. 2011;4(5):358-64 - PubMed
  71. Gene. 2008 Nov 15;424(1-2):40-7 - PubMed
  72. Am J Clin Nutr. 1991 Jun;53(6 Suppl):1543S-1551S - PubMed
  73. Curr Opin Cardiol. 2008 Nov;23(6):591-8 - PubMed
  74. BMC Genet. 2004 Jun 03;5:13 - PubMed
  75. J Am Coll Cardiol. 2009 May 26;53(21):1925-32 - PubMed
  76. NCHS Data Brief. 2017 Oct;(288):1-8 - PubMed
  77. Nat Methods. 2011 Dec 04;9(2):179-81 - PubMed
  78. Hum Mol Genet. 2019 Jan 1;28(1):166-174 - PubMed
  79. Obes Rev. 2016 Mar;17(3):262-75 - PubMed
  80. Nature. 2015 Feb 12;518(7538):197-206 - PubMed
  81. Popul Health Metr. 2012 Nov 20;10(1):22 - PubMed
  82. J Clin Invest. 2007 Aug;117(8):2145-54 - PubMed

Publication Types

Grant support